Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | DK43_RS08865 | Genome accession | NZ_CP007573 |
| Coordinates | 1838005..1840137 (-) | Length | 710 a.a. |
| NCBI ID | WP_022525288.1 | Uniprot ID | A0AAI9NH90 |
| Organism | Streptococcus anginosus strain SA1 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1833005..1845137
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DK43_RS08835 (DK43_09050) | - | 1833086..1833787 (-) | 702 | WP_003028497.1 | L-ribulose-5-phosphate 4-epimerase | - |
| DK43_RS08840 (DK43_09055) | - | 1833781..1834650 (-) | 870 | WP_022525287.1 | L-ribulose-5-phosphate 3-epimerase | - |
| DK43_RS08845 (DK43_09060) | - | 1834654..1835319 (-) | 666 | WP_003032302.1 | 3-keto-L-gulonate-6-phosphate decarboxylase UlaD | - |
| DK43_RS08850 (DK43_09065) | - | 1835367..1835852 (-) | 486 | WP_006269994.1 | PTS sugar transporter subunit IIA | - |
| DK43_RS08855 (DK43_09070) | - | 1836039..1836320 (-) | 282 | WP_003028490.1 | PTS sugar transporter subunit IIB | - |
| DK43_RS08860 (DK43_09075) | - | 1836351..1837808 (-) | 1458 | WP_003028488.1 | PTS ascorbate transporter subunit IIC | - |
| DK43_RS08865 (DK43_09085) | clpC | 1838005..1840137 (-) | 2133 | WP_022525288.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| DK43_RS08870 (DK43_09090) | glmS | 1840575..1842389 (-) | 1815 | WP_003028480.1 | glutamine--fructose-6-phosphate transaminase (isomerizing) | - |
| DK43_RS08875 (DK43_09095) | - | 1842778..1843977 (-) | 1200 | WP_003028479.1 | acetate kinase | - |
| DK43_RS08880 (DK43_09100) | comYH | 1844024..1844977 (-) | 954 | WP_003028478.1 | class I SAM-dependent methyltransferase | Machinery gene |
Sequence
Protein
Download Length: 710 a.a. Molecular weight: 78732.69 Da Isoelectric Point: 4.6520
>NTDB_id=121234 DK43_RS08865 WP_022525288.1 1838005..1840137(-) (clpC) [Streptococcus anginosus strain SA1]
MNNNYNNFDNMDDLFNQLMGRMGGFNSENRRYLINGREVTPEEFAQYRATGKLPKQAMEAQNPQMQTQTGNPKQDGILAK
LGRNLTEEARQDMLDPVIGRNKEIQETAEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISVDIS
GLEAGTQYRGSFEENIQNLVSEVKEAGNVILFFDEIHQILGAGSTGGDSGSKGLADILKPALSRGDLTVIGATTQDEYRN
TILKNAALARRFNEVKVNAPSAEDTYKILQGIRDLYEKHHNVILPDEVLKAAVDYSIQYIPQRSLPDKAIDLVDVTAAHL
AAQHPVTDVHAVEREIAEQKAKQEAAVEKEDFETALNAKMRIEELEKKIENHTEDMKVTATVNDVAESVERMTGIPVSQM
GSSDIERLKEMNARLKTKVIGQNEAVEAVARAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGTKDAIIR
LDMSEYSDRTAVSKLIGTTAGYVGYDDNSNTLTERVRRNPYSIILLDEIEKADSQVITLLLQVLDDGRLTDGQGNTVNFK
NTVIIATSNAGFGYESFTGDEEKDMKIMDRLKPYFRPEFLNRFNAVIEFSHLGKEDLAEIVELMLDEVNQTLAKKDITLT
VTDAAKAYLAEEGYDEVMGVRPLRRVIEQQIRDKVTDYHLDHLDVKHLLADLKDDELVIEEATDDSATKA
MNNNYNNFDNMDDLFNQLMGRMGGFNSENRRYLINGREVTPEEFAQYRATGKLPKQAMEAQNPQMQTQTGNPKQDGILAK
LGRNLTEEARQDMLDPVIGRNKEIQETAEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISVDIS
GLEAGTQYRGSFEENIQNLVSEVKEAGNVILFFDEIHQILGAGSTGGDSGSKGLADILKPALSRGDLTVIGATTQDEYRN
TILKNAALARRFNEVKVNAPSAEDTYKILQGIRDLYEKHHNVILPDEVLKAAVDYSIQYIPQRSLPDKAIDLVDVTAAHL
AAQHPVTDVHAVEREIAEQKAKQEAAVEKEDFETALNAKMRIEELEKKIENHTEDMKVTATVNDVAESVERMTGIPVSQM
GSSDIERLKEMNARLKTKVIGQNEAVEAVARAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGTKDAIIR
LDMSEYSDRTAVSKLIGTTAGYVGYDDNSNTLTERVRRNPYSIILLDEIEKADSQVITLLLQVLDDGRLTDGQGNTVNFK
NTVIIATSNAGFGYESFTGDEEKDMKIMDRLKPYFRPEFLNRFNAVIEFSHLGKEDLAEIVELMLDEVNQTLAKKDITLT
VTDAAKAYLAEEGYDEVMGVRPLRRVIEQQIRDKVTDYHLDHLDVKHLLADLKDDELVIEEATDDSATKA
Nucleotide
Download Length: 2133 bp
>NTDB_id=121234 DK43_RS08865 WP_022525288.1 1838005..1840137(-) (clpC) [Streptococcus anginosus strain SA1]
ATGAACAACAACTACAACAACTTTGATAACATGGATGATCTTTTCAATCAATTGATGGGAAGAATGGGCGGTTTTAATAG
TGAAAATCGGCGTTATCTCATCAATGGACGTGAAGTAACACCAGAGGAATTTGCACAATACCGTGCAACGGGAAAACTTC
CGAAACAGGCAATGGAGGCTCAAAATCCACAAATGCAAACGCAAACAGGCAATCCAAAACAAGATGGCATTTTAGCAAAA
TTGGGTCGCAATTTGACAGAGGAAGCGCGTCAAGATATGCTAGATCCCGTCATTGGACGTAACAAGGAAATTCAAGAAAC
AGCAGAAATTCTGTCTCGTCGGACGAAAAACAATCCAGTTCTAGTCGGAGATGCTGGAGTTGGTAAGACTGCAGTTGTTG
AAGGTTTGGCGCAGGCGATTGTTAATGGTGATGTTCCTGCTGCTATTAAGAATAAAGAAATTATTTCTGTAGATATTTCG
GGATTAGAAGCAGGTACACAGTATCGTGGTAGCTTTGAAGAAAATATTCAAAATTTGGTTTCTGAAGTAAAAGAAGCGGG
CAATGTTATTCTCTTCTTTGATGAAATTCATCAAATCCTCGGTGCTGGAAGCACAGGTGGAGATAGTGGCTCTAAAGGTT
TGGCGGATATTTTGAAACCAGCCCTTTCTCGCGGGGATTTAACGGTGATTGGTGCGACAACGCAAGATGAATACCGCAAC
ACCATTTTGAAAAATGCAGCTCTGGCTCGTCGTTTCAATGAAGTAAAGGTAAATGCTCCTTCTGCAGAAGATACTTATAA
GATTTTGCAAGGAATTCGTGATTTGTACGAAAAACACCACAATGTTATCTTGCCAGATGAAGTGTTAAAAGCAGCTGTGG
ATTATTCGATTCAATATATTCCGCAACGCAGTTTGCCAGATAAAGCGATTGACCTAGTGGATGTGACAGCAGCTCACTTG
GCAGCTCAACACCCTGTTACAGACGTACACGCCGTGGAACGTGAAATCGCAGAGCAAAAGGCCAAACAAGAAGCTGCAGT
TGAAAAAGAAGATTTTGAAACGGCTTTGAATGCTAAGATGCGCATTGAAGAGCTGGAAAAGAAAATTGAAAATCATACAG
AAGACATGAAAGTGACAGCAACTGTCAATGATGTGGCAGAGTCTGTAGAACGCATGACGGGTATTCCTGTTTCCCAAATG
GGCAGCAGCGATATTGAGCGCTTGAAAGAGATGAATGCGCGCCTGAAAACAAAAGTCATCGGACAAAATGAAGCAGTTGA
AGCGGTGGCGCGTGCTATTCGGAGAAATCGTGCAGGTTTTGATGAAGGCAATCGTCCGATTGGTAGCTTCCTCTTTGTCG
GACCAACTGGTGTCGGAAAAACAGAGCTAGCTAAGCAATTAGCGCTTGATATGTTTGGTACAAAAGACGCGATTATCCGT
TTGGATATGTCTGAATACTCTGACCGTACAGCTGTGTCGAAGCTGATTGGTACAACAGCTGGTTATGTGGGATATGATGA
CAACAGCAATACCTTGACAGAACGTGTTCGTCGCAATCCATACTCGATCATTTTGCTGGACGAAATCGAAAAAGCTGATT
CGCAAGTCATCACGCTGTTACTACAAGTCTTAGATGATGGGCGTTTGACAGATGGACAAGGAAATACTGTCAATTTTAAG
AATACGGTTATTATTGCTACTTCTAACGCAGGATTTGGCTATGAAAGCTTTACAGGTGACGAAGAAAAAGATATGAAAAT
TATGGATCGATTGAAACCATACTTCCGTCCAGAATTCTTGAATCGGTTCAATGCAGTTATTGAATTCTCACACCTTGGTA
AAGAAGACTTGGCTGAAATTGTTGAATTGATGCTAGATGAAGTCAACCAAACGCTTGCTAAGAAAGACATCACTCTGACG
GTAACGGATGCCGCAAAAGCTTACCTAGCAGAAGAAGGTTACGATGAAGTCATGGGTGTTCGTCCGCTTCGCCGTGTGAT
TGAACAACAAATCCGTGACAAAGTAACCGACTATCATCTGGATCATTTGGATGTAAAACATCTCTTAGCTGACCTTAAAG
ATGATGAATTAGTCATTGAGGAAGCAACAGATGATTCAGCTACAAAAGCATAA
ATGAACAACAACTACAACAACTTTGATAACATGGATGATCTTTTCAATCAATTGATGGGAAGAATGGGCGGTTTTAATAG
TGAAAATCGGCGTTATCTCATCAATGGACGTGAAGTAACACCAGAGGAATTTGCACAATACCGTGCAACGGGAAAACTTC
CGAAACAGGCAATGGAGGCTCAAAATCCACAAATGCAAACGCAAACAGGCAATCCAAAACAAGATGGCATTTTAGCAAAA
TTGGGTCGCAATTTGACAGAGGAAGCGCGTCAAGATATGCTAGATCCCGTCATTGGACGTAACAAGGAAATTCAAGAAAC
AGCAGAAATTCTGTCTCGTCGGACGAAAAACAATCCAGTTCTAGTCGGAGATGCTGGAGTTGGTAAGACTGCAGTTGTTG
AAGGTTTGGCGCAGGCGATTGTTAATGGTGATGTTCCTGCTGCTATTAAGAATAAAGAAATTATTTCTGTAGATATTTCG
GGATTAGAAGCAGGTACACAGTATCGTGGTAGCTTTGAAGAAAATATTCAAAATTTGGTTTCTGAAGTAAAAGAAGCGGG
CAATGTTATTCTCTTCTTTGATGAAATTCATCAAATCCTCGGTGCTGGAAGCACAGGTGGAGATAGTGGCTCTAAAGGTT
TGGCGGATATTTTGAAACCAGCCCTTTCTCGCGGGGATTTAACGGTGATTGGTGCGACAACGCAAGATGAATACCGCAAC
ACCATTTTGAAAAATGCAGCTCTGGCTCGTCGTTTCAATGAAGTAAAGGTAAATGCTCCTTCTGCAGAAGATACTTATAA
GATTTTGCAAGGAATTCGTGATTTGTACGAAAAACACCACAATGTTATCTTGCCAGATGAAGTGTTAAAAGCAGCTGTGG
ATTATTCGATTCAATATATTCCGCAACGCAGTTTGCCAGATAAAGCGATTGACCTAGTGGATGTGACAGCAGCTCACTTG
GCAGCTCAACACCCTGTTACAGACGTACACGCCGTGGAACGTGAAATCGCAGAGCAAAAGGCCAAACAAGAAGCTGCAGT
TGAAAAAGAAGATTTTGAAACGGCTTTGAATGCTAAGATGCGCATTGAAGAGCTGGAAAAGAAAATTGAAAATCATACAG
AAGACATGAAAGTGACAGCAACTGTCAATGATGTGGCAGAGTCTGTAGAACGCATGACGGGTATTCCTGTTTCCCAAATG
GGCAGCAGCGATATTGAGCGCTTGAAAGAGATGAATGCGCGCCTGAAAACAAAAGTCATCGGACAAAATGAAGCAGTTGA
AGCGGTGGCGCGTGCTATTCGGAGAAATCGTGCAGGTTTTGATGAAGGCAATCGTCCGATTGGTAGCTTCCTCTTTGTCG
GACCAACTGGTGTCGGAAAAACAGAGCTAGCTAAGCAATTAGCGCTTGATATGTTTGGTACAAAAGACGCGATTATCCGT
TTGGATATGTCTGAATACTCTGACCGTACAGCTGTGTCGAAGCTGATTGGTACAACAGCTGGTTATGTGGGATATGATGA
CAACAGCAATACCTTGACAGAACGTGTTCGTCGCAATCCATACTCGATCATTTTGCTGGACGAAATCGAAAAAGCTGATT
CGCAAGTCATCACGCTGTTACTACAAGTCTTAGATGATGGGCGTTTGACAGATGGACAAGGAAATACTGTCAATTTTAAG
AATACGGTTATTATTGCTACTTCTAACGCAGGATTTGGCTATGAAAGCTTTACAGGTGACGAAGAAAAAGATATGAAAAT
TATGGATCGATTGAAACCATACTTCCGTCCAGAATTCTTGAATCGGTTCAATGCAGTTATTGAATTCTCACACCTTGGTA
AAGAAGACTTGGCTGAAATTGTTGAATTGATGCTAGATGAAGTCAACCAAACGCTTGCTAAGAAAGACATCACTCTGACG
GTAACGGATGCCGCAAAAGCTTACCTAGCAGAAGAAGGTTACGATGAAGTCATGGGTGTTCGTCCGCTTCGCCGTGTGAT
TGAACAACAAATCCGTGACAAAGTAACCGACTATCATCTGGATCATTTGGATGTAAAACATCTCTTAGCTGACCTTAAAG
ATGATGAATTAGTCATTGAGGAAGCAACAGATGATTCAGCTACAAAAGCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Lactococcus lactis subsp. cremoris KW2 |
47.893 |
100 |
0.48 |
| clpE | Streptococcus mutans UA159 |
48.62 |
91.831 |
0.446 |
| clpE | Streptococcus pneumoniae Rx1 |
48.657 |
89.155 |
0.434 |
| clpE | Streptococcus pneumoniae D39 |
48.657 |
89.155 |
0.434 |
| clpE | Streptococcus pneumoniae R6 |
48.657 |
89.155 |
0.434 |
| clpE | Streptococcus pneumoniae TIGR4 |
48.413 |
88.732 |
0.43 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
46.594 |
90.986 |
0.424 |
| clpC | Streptococcus pneumoniae D39 |
43.218 |
89.296 |
0.386 |
| clpC | Streptococcus pneumoniae Rx1 |
43.218 |
89.296 |
0.386 |
| clpC | Streptococcus pneumoniae TIGR4 |
43.06 |
89.296 |
0.385 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
43.78 |
87.183 |
0.382 |
| clpC | Streptococcus thermophilus LMG 18311 |
42.429 |
89.296 |
0.379 |
| clpC | Streptococcus mutans UA159 |
43.178 |
87.746 |
0.379 |
| clpC | Streptococcus thermophilus LMD-9 |
41.875 |
90.141 |
0.377 |