Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   DK43_RS08415 Genome accession   NZ_CP007573
Coordinates   1749367..1750098 (-) Length   243 a.a.
NCBI ID   WP_004224310.1    Uniprot ID   A0AAI9NHB2
Organism   Streptococcus anginosus strain SA1     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1744367..1755098
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DK43_RS08390 (DK43_08600) rimP 1744678..1745166 (-) 489 WP_004224293.1 ribosome maturation factor RimP -
  DK43_RS08395 (DK43_08605) - 1745414..1746103 (-) 690 WP_037582627.1 VIT family protein -
  DK43_RS08400 (DK43_08610) trmB 1746844..1747479 (-) 636 WP_041331904.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DK43_RS08405 (DK43_08615) - 1747476..1748273 (-) 798 WP_004224303.1 phosphotransferase family protein -
  DK43_RS08410 (DK43_08620) - 1748324..1749370 (-) 1047 WP_004224306.1 ABC transporter permease -
  DK43_RS08415 (DK43_08625) pptA 1749367..1750098 (-) 732 WP_004224310.1 ABC transporter ATP-binding protein Regulator
  DK43_RS08420 (DK43_08630) - 1750167..1750577 (+) 411 WP_004224313.1 HIT family protein -
  DK43_RS08425 (DK43_08635) - 1750587..1750874 (+) 288 WP_004224316.1 hypothetical protein -
  DK43_RS08430 (DK43_08640) - 1750921..1752036 (-) 1116 WP_004224318.1 LCP family protein -
  DK43_RS08435 (DK43_08645) - 1752043..1752564 (-) 522 WP_004224322.1 GNAT family N-acetyltransferase -
  DK43_RS08440 (DK43_08650) tsaE 1752557..1752997 (-) 441 WP_003033807.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DK43_RS08445 (DK43_08655) - 1753240..1754679 (-) 1440 WP_004224328.1 NCS2 family permease -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26832.41 Da        Isoelectric Point: 4.7336

>NTDB_id=121230 DK43_RS08415 WP_004224310.1 1749367..1750098(-) (pptA) [Streptococcus anginosus strain SA1]
MLEIKGLTGGYVNIPVLKDISFTVGNGELVGLIGLNGAGKSTTINEIIGLLTPYKGKILIDGAKLQDSPTAYREKIGFIP
ETPSLYEELTLREHIETVAMAYDVEQKVAFARVEKLLTMFRLKEKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPVAIADLIELLEDEKAKGKSILMSTHVLDSAEKMCDSFVILHKGEIRAKGNLAELRAEFAMPEASLNDIYLALTEE
ASL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=121230 DK43_RS08415 WP_004224310.1 1749367..1750098(-) (pptA) [Streptococcus anginosus strain SA1]
ATGTTAGAAATAAAAGGGCTTACAGGGGGCTATGTGAATATCCCTGTTTTAAAAGACATCAGTTTCACAGTAGGAAATGG
GGAACTGGTGGGGTTGATTGGCTTGAATGGTGCGGGTAAATCCACTACAATCAATGAAATTATCGGACTTTTAACTCCTT
ATAAGGGTAAAATTTTAATTGACGGTGCCAAACTGCAAGATAGTCCTACGGCCTATCGTGAGAAAATTGGTTTTATTCCG
GAAACACCTAGTTTGTACGAAGAATTGACTTTAAGAGAACATATTGAAACGGTTGCTATGGCCTATGATGTGGAGCAAAA
GGTGGCTTTTGCGCGCGTGGAGAAATTATTGACCATGTTTCGCTTGAAAGAAAAATTAGATTGGTTTCCGGTGCATTTTT
CTAAAGGAATGAAGCAAAAAGTCATGATTATCTGTGCATTTGTGGTTGACCCCAGCCTTTTTATCGTTGATGAACCATTT
TTGGGACTTGATCCAGTTGCCATTGCTGACTTGATAGAGCTTTTGGAGGATGAAAAGGCAAAAGGCAAGTCAATTCTCAT
GAGCACGCACGTGCTGGATTCGGCAGAAAAGATGTGTGATTCATTCGTGATATTGCATAAGGGAGAAATCCGAGCTAAAG
GCAATTTAGCAGAATTACGAGCAGAATTTGCCATGCCAGAAGCTAGTCTCAATGACATTTATCTAGCTTTGACAGAAGAG
GCGAGCCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

72.803

98.354

0.716
  pptA Streptococcus salivarius strain HSISS4

72.385

98.354

0.712

Multiple sequence alignment