Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   DK43_RS02175 Genome accession   NZ_CP007573
Coordinates   446407..448116 (+) Length   569 a.a.
NCBI ID   WP_041331570.1    Uniprot ID   -
Organism   Streptococcus anginosus strain SA1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 441407..453116
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DK43_RS02155 (DK43_02235) - 442252..444150 (+) 1899 WP_022525147.1 sucrose-specific PTS transporter subunit IIBC -
  DK43_RS02160 (DK43_02240) scrK 444425..445324 (+) 900 WP_037582535.1 fructokinase ScrK -
  DK43_RS02165 (DK43_02245) - 445389..445799 (+) 411 WP_037582532.1 peptide deformylase -
  DK43_RS02170 (DK43_02250) - 445956..446414 (+) 459 WP_004224071.1 MarR family winged helix-turn-helix transcriptional regulator -
  DK43_RS02175 (DK43_02255) rcrP 446407..448116 (+) 1710 WP_041331570.1 ABC transporter ATP-binding protein Regulator
  DK43_RS02180 (DK43_02260) rcrQ 448106..449866 (+) 1761 WP_003027423.1 ABC transporter ATP-binding protein Regulator
  DK43_RS02185 (DK43_02265) - 450076..450390 (+) 315 WP_022525145.1 PTS cellobiose transporter subunit IIB -
  DK43_RS02190 (DK43_02270) - 450401..450721 (+) 321 WP_003027417.1 PTS cellobiose transporter subunit IIA -
  DK43_RS02195 (DK43_02275) - 450855..452252 (-) 1398 WP_003027414.1 glycoside hydrolase family 1 protein -

Sequence

Protein


Download         Length: 569 a.a.        Molecular weight: 63214.73 Da        Isoelectric Point: 7.4100

>NTDB_id=121199 DK43_RS02175 WP_041331570.1 446407..448116(+) (rcrP) [Streptococcus anginosus strain SA1]
MFKLFKRLTAKEVGMIVISILFTCLTVYLELEVPTYISKITELLQTRGTVVSDLWNPGLKMIGLSFASFLSAVVVGFIAA
RLAASFTTSLRSDIFNRVLDYSDAEIKRFSIPSLLTRTTNDLTQIQLMITMGLQVVTRGPIMAIWAITKIIGKSEYWLWA
VIVAVIVNIIMTTVLMTLAFPKQSVIQRLTDKLNSITRESLTGIRVVRAYNAEDYQDDKFAGANDEVTRLNLFVSRLMAI
LNPIMMGISSGLTLAIYWIGAYLIQDAALPERLPIFSDMVVFMSYAMQVVMGFMLMAALFIILPRTLVSAGRINEVLDLY
STIESPEHPKEAKDIKGEVVFDNVSFRYAKNSEAVIEHVSFTAKAGETVAFIGSTGSGKSTLISLIPRFYDVTEGRILVD
GVNVKDYQLEDLHNKVGYIPQKAVLFSGDIKSNLDLAQAKSFVEEKEGGLHSEVAQSGTNFSGGQKQRLAIARALARKPE
ILIFDDSFSALDYKTDRILREELAKKVKDTTRLIVAQRISTIMDADQILVLDKGKVVGQGTHKELLATNAVYQEIAYSQL
SKEELENGK

Nucleotide


Download         Length: 1710 bp        

>NTDB_id=121199 DK43_RS02175 WP_041331570.1 446407..448116(+) (rcrP) [Streptococcus anginosus strain SA1]
ATGTTTAAATTATTTAAACGTTTAACTGCTAAAGAAGTAGGGATGATTGTCATTAGTATCTTGTTTACTTGTTTAACAGT
TTATTTGGAATTAGAGGTTCCAACTTATATTTCAAAAATTACGGAACTCCTACAGACGAGAGGGACAGTAGTTTCTGACC
TGTGGAATCCAGGTTTGAAAATGATTGGCTTATCTTTTGCGAGCTTTCTAAGTGCAGTAGTAGTTGGCTTTATAGCGGCT
AGATTAGCAGCTAGCTTTACGACGAGTTTGCGGTCGGATATTTTCAATCGTGTACTGGATTATTCAGATGCCGAAATTAA
GAGATTTTCTATTCCGAGTCTTTTGACCCGGACAACCAATGATCTTACGCAAATTCAACTTATGATTACAATGGGCTTGC
AAGTTGTGACTCGTGGACCGATTATGGCGATTTGGGCGATTACGAAAATCATTGGGAAATCAGAATATTGGCTCTGGGCA
GTTATTGTGGCGGTAATTGTGAATATTATCATGACAACAGTTCTGATGACGCTTGCCTTTCCAAAGCAATCCGTTATTCA
ACGGTTGACTGATAAGTTGAACAGTATTACGCGTGAAAGTCTAACAGGGATTCGTGTTGTTCGGGCTTACAATGCTGAAG
ACTATCAAGATGACAAGTTTGCAGGAGCCAATGATGAAGTGACTCGTTTGAATCTCTTTGTCAGTCGTCTCATGGCAATT
TTAAATCCAATTATGATGGGGATTTCGAGCGGATTGACTTTAGCGATTTATTGGATTGGGGCTTACTTGATTCAAGACGC
AGCTTTACCAGAGCGATTGCCTATCTTTAGTGATATGGTAGTCTTTATGTCTTATGCCATGCAAGTGGTAATGGGCTTCA
TGCTCATGGCGGCTCTTTTTATCATTCTACCTCGTACCTTGGTGTCTGCTGGACGGATTAATGAAGTGCTTGATTTATAT
TCAACGATTGAGTCTCCAGAACACCCTAAAGAAGCTAAAGATATTAAAGGAGAAGTGGTATTTGACAATGTGTCTTTCCG
CTATGCTAAAAACTCTGAGGCTGTCATTGAGCATGTCAGCTTTACAGCAAAAGCAGGTGAAACCGTAGCTTTCATTGGTT
CAACCGGTTCTGGGAAATCTACTCTAATTAGCTTAATTCCTCGTTTTTATGATGTGACAGAAGGAAGAATTTTAGTAGAC
GGCGTAAACGTCAAAGATTATCAGCTAGAAGATTTGCATAATAAAGTTGGCTACATTCCACAAAAAGCTGTCCTCTTCTC
TGGTGATATAAAGAGTAATTTGGACTTGGCACAAGCGAAATCATTTGTTGAAGAAAAAGAAGGTGGTCTGCACTCAGAGG
TCGCACAAAGCGGGACCAATTTCTCTGGTGGGCAAAAGCAACGTTTGGCAATTGCGCGTGCGCTTGCTCGCAAGCCTGAA
ATTTTGATTTTTGATGATTCATTTTCAGCGCTGGACTATAAGACAGACCGCATTTTGCGGGAAGAATTAGCGAAAAAAGT
GAAGGACACAACCAGATTGATTGTGGCGCAGCGGATTTCAACGATTATGGATGCTGATCAGATTTTGGTACTGGATAAAG
GAAAAGTAGTCGGTCAGGGTACTCATAAAGAATTGCTGGCAACGAACGCAGTTTACCAAGAAATTGCTTACTCACAATTA
TCAAAGGAGGAATTGGAAAATGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-291)

ABC transporter (ABC_tran)

(357-487)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

69.167

100

0.729

Multiple sequence alignment