Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   DX05_RS11110 Genome accession   NZ_CP007572
Coordinates   2230595..2231368 (+) Length   257 a.a.
NCBI ID   WP_000456084.1    Uniprot ID   A0AAD2WW20
Organism   Streptococcus agalactiae strain GBS6     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2225595..2236368
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DX05_RS11095 (DX05_11250) - 2227084..2228535 (+) 1452 WP_041326846.1 IS1182 family transposase -
  DX05_RS11100 (DX05_11255) rlmH 2228588..2229067 (-) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DX05_RS11105 (DX05_11260) htrA 2229268..2230497 (+) 1230 WP_000728357.1 trypsin-like peptidase domain-containing protein Regulator
  DX05_RS11110 (DX05_11265) spo0J 2230595..2231368 (+) 774 WP_000456084.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29239.71 Da        Isoelectric Point: 9.8145

>NTDB_id=121180 DX05_RS11110 WP_000456084.1 2230595..2231368(+) (spo0J) [Streptococcus agalactiae strain GBS6]
MEYLETININHIAPNPYQPRLEFNTKELEELADSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFANQEELNRIINTLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=121180 DX05_RS11110 WP_000456084.1 2230595..2231368(+) (spo0J) [Streptococcus agalactiae strain GBS6]
ATGGAATATTTAGAAACGATCAACATCAATCATATTGCTCCAAATCCGTATCAACCTCGCCTAGAATTTAATACAAAAGA
ACTAGAAGAATTAGCCGACTCTATTAAAATTAATGGCCTTATTCAACCCATTATTGTAAGACCGTCAGCAGTCTTTGGTT
ACGAACTAGTAGCCGGAGAACGACGGTTAAGAGCCGCAAAGTTAGCTAAATTGGAAAGTATACCTGCAATTATAAAATCC
TATAATAATGATGATAGTATGCAATTAGCTATTGTCGAAAATTTACAACGATCTAATTTGTCACCCATTGAAGAGGCTAA
AGCCTACTCTCAACTTCTACAAAAGAAAAGTATGACACATGAAGAGTTAGCAAAATATATGGGAAAATCTCGTCCCTATA
TATCAAATACGATACGACTACTAAATTTACCGCCACTAATTACTTCAGCTATTGAAGAAGGAAAACTTTCCTCTGGTCAT
GCGCGTGCACTACTCAGTCTACCAGATGCTAGTCAACAGAAAGATTGGTATCAGAGAATCCTCACTGAAGATATTAGTGT
AAGACGACTAGAGAAGTTATTAAAACAAGAAAAGAAAACAAATCATAAGTCACTTCAAAATAAAGATGTCTTTCTAAAAC
ATCAAGAAAATGAGTTAGCTCAATTTCTAGGTAGCAAAGTGAAACTTACTATTAATAAAGATGGTGCTGGCAATATAAAG
ATTGCTTTCGCTAACCAAGAAGAATTAAACAGAATTATCAACACTCTAAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

99.222

0.572

Multiple sequence alignment