Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   DI57_RS10965 Genome accession   NZ_CP007546
Coordinates   2308060..2308686 (-) Length   208 a.a.
NCBI ID   WP_023311030.1    Uniprot ID   A0A1Z3N2L7
Organism   Enterobacter asburiae L1     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2303060..2313686
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DI57_RS10950 (DI57_11020) helD 2303297..2305351 (-) 2055 WP_038417556.1 DNA helicase IV -
  DI57_RS10955 (DI57_11025) - 2305475..2305921 (+) 447 WP_038417558.1 YccF domain-containing protein -
  DI57_RS10960 (DI57_11030) yccS 2305941..2308103 (+) 2163 WP_038417559.1 YccS family putative transporter -
  DI57_RS10965 (DI57_11035) sxy/tfoX 2308060..2308686 (-) 627 WP_023311030.1 TfoX/Sxy family DNA transformation protein Regulator
  DI57_RS10970 (DI57_11040) sulA 2308904..2309413 (+) 510 WP_038417560.1 SOS-induced cell division inhibitor SulA -
  DI57_RS10975 (DI57_11045) ompA 2309768..2310823 (+) 1056 WP_115504044.1 porin OmpA -
  DI57_RS10980 (DI57_11050) matP 2310887..2311339 (-) 453 WP_038417562.1 macrodomain Ter protein MatP -
  DI57_RS10985 (DI57_11055) - 2311526..2313286 (+) 1761 WP_023311027.1 AAA family ATPase -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23906.46 Da        Isoelectric Point: 9.4588

>NTDB_id=120760 DI57_RS10965 WP_023311030.1 2308060..2308686(-) (sxy/tfoX) [Enterobacter asburiae L1]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=120760 DI57_RS10965 WP_023311030.1 2308060..2308686(-) (sxy/tfoX) [Enterobacter asburiae L1]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCTCAGGAATACCTCTCCCCGTTGGGCGAGATTCATCACCGCGCGCT
GTTTGGAGGCTATACCCTGGCGGTGGATGATGCGGTTTTTGCCATGGTGTCAGACGGCGAGCTTTATCTCCGCGCCTGTG
AGGAGAGTGCGAAATACTGTGTAAAAAATGCCTCCTCTTTTTTGACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGGGAGCGACTGCTTCAGCTCTCCTCGTTTGCGCTCAGTGCGGCAAG
AAAAGAACGCTATCAGCGCCATCAACGAAACCGACTTAAGGATCTGCCAAACCTGACCTTTCAGCTTGAGGTTTTGCTCT
TTGAAGCTGGCATTACCAATGAGGAAACGCTGCGGGCGCTGGGTGCAAGAGCGAGCTGGCTAAAGATGCGGGCAAAAAAC
AAAGCGCTCAGTATTAAAGTTCTCTTCGCACTGGAAGGGGCTATCGAGGGGCTACATGAGGCGGCACTCCCGGCGGGCAT
TCGCCGGGAGCTAACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Z3N2L7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567

Multiple sequence alignment