Detailed information NTG0120699

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: SH02_RS01175
• Genome accession: NZ_CP010439
• Coordinates: 239702..240727 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli K-12 strain K-12 MG1655
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 234702..245727

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SH02_RS01145 (SH02_01145)	zapB	234786..235031 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
SH02_RS01150 (SH02_01150)	rraA	235116..235601 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
SH02_RS01155 (SH02_01155)	menA	235694..236620 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
SH02_RS01160 (SH02_01160)	hslU	236687..238018 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
SH02_RS01165 (SH02_01165)	hslV	238028..238558 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
SH02_RS01170 (SH02_01170)	ftsN	238651..239610 (-)	960	WP_000068828.1	cell division protein FtsN	-
SH02_RS01175 (SH02_01175)	cytR	239702..240727 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
SH02_RS01180 (SH02_01180)	priA	240883..243081 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
SH02_RS01185 (SH02_01185)	rpmE	243284..243496 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
SH02_RS01190 (SH02_01190)	yiiX	243557..244165 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
SH02_RS01195 (SH02_01195)	metJ	244349..244666 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=120699 SH02_RS01175 WP_000644904.1 239702..240727(-) (cytR) [Escherichia coli K-12 strain K-12 MG1655]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=120699 SH02_RS01175 WP_000644904.1 239702..240727(-) (cytR) [Escherichia coli K-12 strain K-12 MG1655]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628