Detailed information NTG0120578

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: BL01_RS12135
• Genome accession: NZ_CP007535
• Coordinates: 2559113..2559814 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain AC29
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2554113..2564814

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BL01_RS12105 (BL01_12265)	-	2554419..2554862 (-)	444	WP_001246675.1	SRPBCC family protein	-
BL01_RS12110 (BL01_12270)	tadA	2554932..2555435 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
BL01_RS12115 (BL01_12275)	-	2555442..2556566 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
BL01_RS12120 (BL01_12280)	ung	2556563..2557276 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
BL01_RS12125 (BL01_12285)	-	2557327..2557923 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
BL01_RS12130 (BL01_12290)	gspK	2558154..2559113 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
BL01_RS12135 (BL01_12295)	xcpW	2559113..2559814 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
BL01_RS12140 (BL01_12300)	xcpV	2559814..2560194 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
BL01_RS12145 (BL01_12305)	-	2560184..2560738 (-)	555	WP_000841373.1	type II secretion system protein	-
BL01_RS12150 (BL01_12310)	-	2560748..2561356 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
BL01_RS12155 (BL01_12315)	-	2561394..2562167 (-)	774	WP_000497298.1	TatD family hydrolase	-
BL01_RS12160 (BL01_12320)	-	2562185..2562526 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
BL01_RS12165 (BL01_12325)	-	2562538..2563518 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
BL01_RS12170 (BL01_12330)	kdsB	2563530..2564291 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=120578 BL01_RS12135 WP_000594589.1 2559113..2559814(-) (xcpW) [Acinetobacter baumannii strain AC29]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=120578 BL01_RS12135 WP_000594589.1 2559113..2559814(-) (xcpW) [Acinetobacter baumannii strain AC29]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996