Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | RU84_RS11445 | Genome accession | NZ_CP010397 |
| Coordinates | 2462140..2464719 (-) | Length | 859 a.a. |
| NCBI ID | WP_001210050.1 | Uniprot ID | V5VGK1 |
| Organism | Acinetobacter baumannii strain 6200 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2457140..2469719
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RU84_RS11425 (RU84_11425) | - | 2458096..2458440 (-) | 345 | WP_029424271.1 | hypothetical protein | - |
| RU84_RS11430 (RU84_11430) | rlmKL | 2458679..2460883 (+) | 2205 | WP_029424272.1 | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | - |
| RU84_RS11435 (RU84_11435) | - | 2460910..2461326 (-) | 417 | WP_001060738.1 | hypothetical protein | - |
| RU84_RS11440 (RU84_11440) | - | 2461595..2462083 (+) | 489 | WP_000941316.1 | CinA family protein | - |
| RU84_RS11445 (RU84_11445) | clpC | 2462140..2464719 (-) | 2580 | WP_001210050.1 | ATP-dependent chaperone ClpB | Regulator |
| RU84_RS11450 (RU84_11450) | - | 2464958..2465926 (-) | 969 | WP_005804963.1 | IS30 family transposase | - |
| RU84_RS11455 (RU84_11455) | - | 2466111..2466917 (+) | 807 | WP_001237343.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| RU84_RS11460 (RU84_11460) | - | 2466914..2467339 (-) | 426 | WP_001026238.1 | GNAT family N-acetyltransferase | - |
| RU84_RS11465 (RU84_11465) | - | 2467433..2467855 (-) | 423 | WP_001195082.1 | OsmC family protein | - |
| RU84_RS20260 | - | 2467934..2468053 (-) | 120 | Protein_2271 | hypothetical protein | - |
| RU84_RS11470 (RU84_11470) | crp | 2468294..2469001 (+) | 708 | WP_000203217.1 | cAMP-activated global transcriptional regulator CRP | Regulator |
Sequence
Protein
Download Length: 859 a.a. Molecular weight: 95142.36 Da Isoelectric Point: 4.9733
>NTDB_id=120406 RU84_RS11445 WP_001210050.1 2462140..2464719(-) (clpC) [Acinetobacter baumannii strain 6200]
MRFEKFTNRLQQALSDAQSLAMGKDHTAIAGIHILSTLLEEPSNISLLQQAGARLPELKQKLEQALKDAPTIANPTGDVN
LNPEAVKALNLADRYAQKAGDEFLSTDWVLLGLAETGETKNILSAVGVTPDSLRKVIENIRGSDKVMSNNHEDQRDSLNK
YTIDLTERALSGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLG
SLLAGAKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYI
EKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKM
EIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKAEVTHLEKQIAEVEKEYNDLEEVWKAEKTLVEGTKQAQVELDKAR
IAFEKAQREGDLAEAARLQYGVIPELQKQLEQDEVAEENEEPKLIRTKVTENEIAEVVSAATGIPVAKMMQGEREKLLHM
EEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHS
VSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGS
QDVRELGEGATDDEVRTIVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMSLTVDDSAFDL
LIDAGFDPVYGARPLKRAIQQQVENTLAQKILSGDFVAGDTILVKGENGHLVFDKLKLS
MRFEKFTNRLQQALSDAQSLAMGKDHTAIAGIHILSTLLEEPSNISLLQQAGARLPELKQKLEQALKDAPTIANPTGDVN
LNPEAVKALNLADRYAQKAGDEFLSTDWVLLGLAETGETKNILSAVGVTPDSLRKVIENIRGSDKVMSNNHEDQRDSLNK
YTIDLTERALSGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLG
SLLAGAKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYI
EKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKM
EIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKAEVTHLEKQIAEVEKEYNDLEEVWKAEKTLVEGTKQAQVELDKAR
IAFEKAQREGDLAEAARLQYGVIPELQKQLEQDEVAEENEEPKLIRTKVTENEIAEVVSAATGIPVAKMMQGEREKLLHM
EEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHS
VSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGS
QDVRELGEGATDDEVRTIVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMSLTVDDSAFDL
LIDAGFDPVYGARPLKRAIQQQVENTLAQKILSGDFVAGDTILVKGENGHLVFDKLKLS
Nucleotide
Download Length: 2580 bp
>NTDB_id=120406 RU84_RS11445 WP_001210050.1 2462140..2464719(-) (clpC) [Acinetobacter baumannii strain 6200]
ATGCGATTTGAAAAATTTACGAACCGCTTGCAGCAAGCCCTCTCAGATGCTCAATCCTTAGCGATGGGTAAAGACCATAC
AGCTATAGCAGGTATTCATATTTTGAGTACTTTATTGGAAGAGCCGTCCAATATTAGTTTGTTGCAACAAGCAGGTGCAC
GGTTACCTGAACTTAAACAAAAGCTAGAGCAGGCTTTAAAAGATGCTCCGACTATTGCTAACCCGACGGGCGATGTCAAT
TTAAACCCAGAAGCAGTTAAAGCACTCAACTTGGCAGATCGATACGCGCAAAAAGCTGGCGATGAATTTTTGTCAACTGA
CTGGGTTTTATTGGGCTTGGCAGAAACTGGTGAAACAAAAAATATTTTAAGTGCCGTAGGTGTAACTCCCGACAGCTTAC
GCAAAGTAATTGAAAATATTCGAGGTAGTGACAAAGTCATGAGTAATAATCACGAAGACCAACGTGACTCACTTAATAAA
TATACGATTGATTTAACCGAGCGGGCTTTATCGGGGAAACTTGATCCGGTGATTGGGCGTGATGATGAGATCCGCCGTAC
CATTCAGGTCTTGTCACGCCGTACTAAAAATAACCCAGTACTCATTGGTGAACCTGGGGTAGGTAAAACCGCTATTGTTG
AAGGTTTGGCACAACGTATTGTCAATGGTGAAGTACCAGAAGGCTTAAAGAATAAACGTGTTTTATCGTTAGATTTAGGT
TCATTGCTTGCAGGTGCTAAGTATCGTGGTGAGTTTGAAGAACGTTTAAAAGCTGTTTTAAAAGATTTGGCGAAACACGA
AGGCGAAATCATCTTATTCATTGACGAGTTACATACACTCGTTGGTGCTGGTAAAGGTGACGGCGCGATGGATGCAGGTA
ATATGTTAAAACCTGCGTTGGCTCGTGGTGAGTTGCGCTGTGTGGGTGCAACAACCTTAGATGAATATCGCCAATACATT
GAAAAAGATGCAGCCTTGGAGCGTCGTTTCCAAAAAGTGCTGGTCGATGAACCAAGTGTAGAAGATACCATTGCGATTTT
ACGTGGTCTGAAAGAAAAGTATGCGACTCACCATGGCGTACAGATTTTAGACTCAGCGATTATTGCTGCGGCGAAAATGT
CTCATCGTTATATTACAGACCGTCAATTACCGGACAAGGCAATTGACCTAATTGATGAGGCCGCTTCTCGTATTAAGATG
GAAATCGATTCTAAGCCAGAAGCACTTGATAAACTTGATCGCCGTTTAATCCAGTTGAAAATGCAATTGGAAGCGGTGAA
AAAAGATGAAGACGCAGGCAGTAAGGCCGAAGTTACTCATCTTGAAAAACAGATCGCTGAAGTCGAGAAAGAATACAACG
ATCTGGAAGAAGTGTGGAAAGCTGAGAAAACACTGGTAGAAGGCACTAAACAAGCTCAGGTTGAACTTGATAAAGCACGT
ATTGCTTTTGAAAAAGCTCAGCGTGAAGGCGATTTGGCAGAAGCAGCACGTTTGCAATATGGTGTAATTCCAGAGTTGCA
AAAACAACTTGAACAAGATGAAGTTGCTGAAGAAAACGAAGAGCCAAAACTCATTCGTACAAAAGTAACTGAAAATGAAA
TTGCCGAAGTCGTTAGTGCTGCAACAGGTATTCCGGTTGCTAAAATGATGCAAGGCGAGCGTGAAAAACTCCTTCATATG
GAAGAGTTCTTGCATGACCGTGTTGTAGGGCAAGATGAAGCAGTCGTTGCGGTATCGAATGCTGTTCGCCGTTCACGTGC
CGGTTTGTCTGACCCGAATCGTCCTAGCGGATCATTCTTGTTCTTAGGACCAACAGGTGTTGGTAAAACTGAGTTGACTA
AAGCTTTAGCTAACTTCTTGTTTGACAGTGATGATGCCATGATTCGTATCGATATGAGTGAATTCATGGAGAAACATTCT
GTCAGCCGTTTAGTTGGTGCGCCTCCGGGTTACGTAGGTTACGAAGAGGGCGGTGTTTTAACCGAAGCTGTTCGCCGTAA
ACCATATAGCGTAGTGTTGTTTGATGAGGTTGAAAAAGCGCATCCAGATGTTTTCAATATCTTGCTACAAGTGTTAGACG
ATGGACGCTTAACCGACTCACAAGGTCGTGTAGTGGACTTTAAAAACACGGTTATTGTGATGACATCGAACTTGGGTTCA
CAAGATGTACGTGAACTTGGTGAAGGTGCAACTGATGATGAAGTGCGTACTATTGTAATGAATGCGGTAAGTCAGCATTT
CCGTCCGGAGTTTATTAACCGGATTGATGAGTTGGTGATTTTCCATTCACTCAAAAAAGCACAGATTCGTGGCATTGCCG
ATATTCAGTTGGACCGCTTACGCTCACGACTTGTTGATCGTGATATGAGTTTAACTGTAGATGACAGTGCATTTGACTTA
TTGATTGACGCTGGTTTTGACCCTGTATACGGAGCGCGTCCATTGAAACGTGCAATTCAACAACAGGTTGAAAATACACT
AGCTCAAAAAATCTTGTCAGGTGACTTTGTTGCGGGTGATACCATTTTAGTTAAAGGTGAAAATGGTCACTTAGTGTTTG
ATAAGCTGAAACTCAGCTAA
ATGCGATTTGAAAAATTTACGAACCGCTTGCAGCAAGCCCTCTCAGATGCTCAATCCTTAGCGATGGGTAAAGACCATAC
AGCTATAGCAGGTATTCATATTTTGAGTACTTTATTGGAAGAGCCGTCCAATATTAGTTTGTTGCAACAAGCAGGTGCAC
GGTTACCTGAACTTAAACAAAAGCTAGAGCAGGCTTTAAAAGATGCTCCGACTATTGCTAACCCGACGGGCGATGTCAAT
TTAAACCCAGAAGCAGTTAAAGCACTCAACTTGGCAGATCGATACGCGCAAAAAGCTGGCGATGAATTTTTGTCAACTGA
CTGGGTTTTATTGGGCTTGGCAGAAACTGGTGAAACAAAAAATATTTTAAGTGCCGTAGGTGTAACTCCCGACAGCTTAC
GCAAAGTAATTGAAAATATTCGAGGTAGTGACAAAGTCATGAGTAATAATCACGAAGACCAACGTGACTCACTTAATAAA
TATACGATTGATTTAACCGAGCGGGCTTTATCGGGGAAACTTGATCCGGTGATTGGGCGTGATGATGAGATCCGCCGTAC
CATTCAGGTCTTGTCACGCCGTACTAAAAATAACCCAGTACTCATTGGTGAACCTGGGGTAGGTAAAACCGCTATTGTTG
AAGGTTTGGCACAACGTATTGTCAATGGTGAAGTACCAGAAGGCTTAAAGAATAAACGTGTTTTATCGTTAGATTTAGGT
TCATTGCTTGCAGGTGCTAAGTATCGTGGTGAGTTTGAAGAACGTTTAAAAGCTGTTTTAAAAGATTTGGCGAAACACGA
AGGCGAAATCATCTTATTCATTGACGAGTTACATACACTCGTTGGTGCTGGTAAAGGTGACGGCGCGATGGATGCAGGTA
ATATGTTAAAACCTGCGTTGGCTCGTGGTGAGTTGCGCTGTGTGGGTGCAACAACCTTAGATGAATATCGCCAATACATT
GAAAAAGATGCAGCCTTGGAGCGTCGTTTCCAAAAAGTGCTGGTCGATGAACCAAGTGTAGAAGATACCATTGCGATTTT
ACGTGGTCTGAAAGAAAAGTATGCGACTCACCATGGCGTACAGATTTTAGACTCAGCGATTATTGCTGCGGCGAAAATGT
CTCATCGTTATATTACAGACCGTCAATTACCGGACAAGGCAATTGACCTAATTGATGAGGCCGCTTCTCGTATTAAGATG
GAAATCGATTCTAAGCCAGAAGCACTTGATAAACTTGATCGCCGTTTAATCCAGTTGAAAATGCAATTGGAAGCGGTGAA
AAAAGATGAAGACGCAGGCAGTAAGGCCGAAGTTACTCATCTTGAAAAACAGATCGCTGAAGTCGAGAAAGAATACAACG
ATCTGGAAGAAGTGTGGAAAGCTGAGAAAACACTGGTAGAAGGCACTAAACAAGCTCAGGTTGAACTTGATAAAGCACGT
ATTGCTTTTGAAAAAGCTCAGCGTGAAGGCGATTTGGCAGAAGCAGCACGTTTGCAATATGGTGTAATTCCAGAGTTGCA
AAAACAACTTGAACAAGATGAAGTTGCTGAAGAAAACGAAGAGCCAAAACTCATTCGTACAAAAGTAACTGAAAATGAAA
TTGCCGAAGTCGTTAGTGCTGCAACAGGTATTCCGGTTGCTAAAATGATGCAAGGCGAGCGTGAAAAACTCCTTCATATG
GAAGAGTTCTTGCATGACCGTGTTGTAGGGCAAGATGAAGCAGTCGTTGCGGTATCGAATGCTGTTCGCCGTTCACGTGC
CGGTTTGTCTGACCCGAATCGTCCTAGCGGATCATTCTTGTTCTTAGGACCAACAGGTGTTGGTAAAACTGAGTTGACTA
AAGCTTTAGCTAACTTCTTGTTTGACAGTGATGATGCCATGATTCGTATCGATATGAGTGAATTCATGGAGAAACATTCT
GTCAGCCGTTTAGTTGGTGCGCCTCCGGGTTACGTAGGTTACGAAGAGGGCGGTGTTTTAACCGAAGCTGTTCGCCGTAA
ACCATATAGCGTAGTGTTGTTTGATGAGGTTGAAAAAGCGCATCCAGATGTTTTCAATATCTTGCTACAAGTGTTAGACG
ATGGACGCTTAACCGACTCACAAGGTCGTGTAGTGGACTTTAAAAACACGGTTATTGTGATGACATCGAACTTGGGTTCA
CAAGATGTACGTGAACTTGGTGAAGGTGCAACTGATGATGAAGTGCGTACTATTGTAATGAATGCGGTAAGTCAGCATTT
CCGTCCGGAGTTTATTAACCGGATTGATGAGTTGGTGATTTTCCATTCACTCAAAAAAGCACAGATTCGTGGCATTGCCG
ATATTCAGTTGGACCGCTTACGCTCACGACTTGTTGATCGTGATATGAGTTTAACTGTAGATGACAGTGCATTTGACTTA
TTGATTGACGCTGGTTTTGACCCTGTATACGGAGCGCGTCCATTGAAACGTGCAATTCAACAACAGGTTGAAAATACACT
AGCTCAAAAAATCTTGTCAGGTGACTTTGTTGCGGGTGATACCATTTTAGTTAAAGGTGAAAATGGTCACTTAGTGTTTG
ATAAGCTGAAACTCAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
46.774 |
100 |
0.473 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
43.052 |
100 |
0.44 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.601 |
82.189 |
0.383 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.886 |
78.347 |
0.383 |
| clpE | Streptococcus mutans UA159 |
46.866 |
81.723 |
0.383 |
| clpC | Streptococcus pneumoniae D39 |
46.459 |
82.189 |
0.382 |
| clpC | Streptococcus pneumoniae Rx1 |
46.459 |
82.189 |
0.382 |
| clpE | Streptococcus pneumoniae TIGR4 |
48.012 |
79.045 |
0.38 |
| clpE | Streptococcus pneumoniae Rx1 |
48.012 |
79.045 |
0.38 |
| clpE | Streptococcus pneumoniae D39 |
48.012 |
79.045 |
0.38 |
| clpE | Streptococcus pneumoniae R6 |
48.012 |
79.045 |
0.38 |