Detailed information    

insolico Bioinformatically predicted

Overview

Name   recC   Type   Machinery gene
Locus tag   NMA510612_RS10070 Genome accession   NZ_CP007524
Coordinates   1915265..1918474 (-) Length   1069 a.a.
NCBI ID   WP_002246384.1    Uniprot ID   X5F904
Organism   Neisseria meningitidis strain 510612     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1910265..1923474
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMA510612_RS10050 (NMA510612_2220) mtrC 1910533..1911771 (-) 1239 WP_002246382.1 multidrug efflux RND transporter periplasmic adaptor subunit MtrC -
  NMA510612_RS14710 (NMA510612_2221) - 1911927..1912085 (-) 159 WP_162051245.1 hypothetical protein -
  NMA510612_RS10055 (NMA510612_2222) mtrR 1912175..1912807 (+) 633 WP_002232911.1 multidrug efflux system transcriptional repressor MtrR -
  NMA510612_RS10060 (NMA510612_2223) - 1913086..1913298 (-) 213 WP_002235133.1 hypothetical protein -
  NMA510612_RS10065 (NMA510612_2224) mtrF 1913629..1915197 (+) 1569 WP_002246383.1 AbgT family antimetabolite efflux transporter MtrF -
  NMA510612_RS10070 (NMA510612_2225) recC 1915265..1918474 (-) 3210 WP_002246384.1 exodeoxyribonuclease V subunit gamma Machinery gene
  NMA510612_RS10075 (NMA510612_2226) - 1918576..1919985 (-) 1410 WP_002246385.1 PepSY domain-containing protein -
  NMA510612_RS10080 (NMA510612_2228) ccoP 1920187..1921522 (-) 1336 Protein_1896 cytochrome-c oxidase, cbb3-type subunit III -
  NMA510612_RS10085 (NMA510612_2229) - 1921546..1921716 (-) 171 WP_002212597.1 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone -
  NMA510612_RS10090 (NMA510612_2230) ccoO 1921721..1922332 (-) 612 WP_002212596.1 cytochrome-c oxidase, cbb3-type subunit II -

Sequence

Protein


Download         Length: 1069 a.a.        Molecular weight: 120737.45 Da        Isoelectric Point: 4.8228

>NTDB_id=120326 NMA510612_RS10070 WP_002246384.1 1915265..1918474(-) (recC) [Neisseria meningitidis strain 510612]
MFYLYQSNRLETLAALFARIQKVKPLKSALQPEQIIVQSQGMRRYLNTCLARDLGVAANLSFSLPAGLTWKLMKKLIPGI
PELSPFAPEVMRWRLLDLFRSEAFRNTAEFEDVRNVLQDYLGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQQGRRLG
LGDDEIWQSKLWRYLDDGRQSAPHRVALWEKLLESLSSDKLPERYFVFGISTMAPMYLQLLHKLSEYCDVFVFALNPSGM
YWGNVIEAAQILKGGGDPDLTQAGHPLLASLGKQGRDFFDFLNEMEIEGETPVFEEGGRDTLLHALQTDIQNLKMPSENV
GSVNTGDGSIRIVSAHSPLRELQILKDKLLKILHEHPDWQPHDIAVLTPNIESYTPFIEAVFGQAQPGAQALPYSVSDVK
ISRRQPLFHALSCLFDLLESRFEVDKVLALLETAPVLRRFGLTEDDLPLLHDMVADLNVRWGLDGEMRGGTDQLFTWKQA
VERMILGWMLPEGGNPMWQDVSAWYADVNQTALFGRFAAFLETLTDIVRIWRQPATVDEWVGRCRGLLKTLFQAEADDQK
AVQNLENEWVKWQAETELAQFSGQLPQQTVIRHIRRFLDSESEAGFLRGGITFCSMVPMRSLPFKVICLLGLNDGDFPRN
TKAAVFDLIAKHPAKGDRARRDDDRYLFLEALISAREILYLSYIGRDIRKDEELAPSSLLGELIDTVAAMTGTNSRQLAQ
NLIEQHPLQAFSRRYFQEGGRSDGIFGTRTDYAAALGQTPEPPQPFFDQPVENAEPVAEIGQDEFIRFWRNPVKVWLQQQ
LAWSEPHIGEAWEPAEPFEPQHADQIAEIYIEARREGRDFAQTAARIGAESLLPSGELGRLWQQDFQTAAKQIDTAVLNS
PKLPPLSYAIPSDGQILKGSLGNLYRCGQVFYAYGKPNAPQRIAFLLEHLIFCAVMPSEAEMRQTFIVQSGETEILAEIA
QDRALQLLSEWMAFFNIGQNRPLPFFAKTSLATAEAFVQKQDWEAALKKAQTAYHGSKVSKGQKDYTEVALVFGNASQNP
LEQPLFENLVRLLADTLAAAEKKEEAGEA

Nucleotide


Download         Length: 3210 bp        

>NTDB_id=120326 NMA510612_RS10070 WP_002246384.1 1915265..1918474(-) (recC) [Neisseria meningitidis strain 510612]
ATGTTTTATCTGTATCAATCCAACCGTCTTGAAACGCTGGCGGCATTGTTTGCCCGCATTCAAAAAGTCAAACCGCTGAA
ATCGGCTTTACAGCCCGAACAGATTATTGTGCAGAGTCAGGGGATGCGCCGCTATCTCAATACCTGCCTCGCCCGCGATT
TGGGCGTGGCGGCGAATTTGTCGTTCAGCCTGCCCGCCGGCCTGACGTGGAAGCTGATGAAAAAACTGATTCCCGGTATT
CCGGAACTCAGCCCGTTTGCACCCGAAGTCATGCGCTGGCGGCTGCTGGATTTGTTCCGCAGTGAAGCATTCCGGAATAC
GGCAGAATTTGAAGATGTGAGGAATGTGCTGCAAGACTATCTGGGCAGCGGCGAATCGGCAGATTACCAGCTTGCGGGAC
AGCTTGCGGACATATTCGACCAATACCTCGTGTACCGTCCTCAGTGGATAGACGCTTGGCAGCAGGGCAGGCGGCTCGGT
TTGGGCGACGACGAAATCTGGCAGTCCAAACTGTGGCGTTACCTCGACGATGGCAGGCAGAGCGCGCCGCACCGTGTCGC
GTTGTGGGAAAAGCTGTTGGAATCTTTAAGCAGTGATAAGCTGCCCGAGCGTTATTTCGTGTTCGGCATTTCCACGATGG
CACCGATGTATTTGCAGCTTTTGCACAAGCTGTCCGAATATTGCGATGTGTTTGTGTTCGCACTCAATCCGAGCGGGATG
TATTGGGGCAACGTCATCGAAGCGGCGCAAATCCTCAAAGGCGGCGGCGATCCCGATTTAACTCAGGCAGGGCATCCGCT
GCTCGCCTCATTGGGCAAGCAGGGGCGCGACTTTTTCGACTTTTTGAACGAAATGGAAATAGAAGGCGAAACGCCGGTAT
TTGAAGAAGGCGGACGCGATACGCTTTTGCACGCCCTGCAAACCGATATTCAAAACCTGAAAATGCCGTCTGAAAATGTG
GGAAGCGTCAACACGGGCGACGGCTCGATACGCATCGTCTCCGCACACAGCCCCTTGCGCGAATTGCAGATACTCAAAGA
CAAGCTGTTGAAAATTCTGCATGAACATCCCGATTGGCAGCCGCATGATATCGCCGTATTAACCCCGAACATCGAATCCT
ATACGCCTTTTATCGAAGCCGTGTTCGGACAGGCGCAGCCCGGTGCGCAGGCATTGCCGTATTCCGTTTCGGACGTGAAA
ATAAGCCGCCGACAACCGCTGTTTCATGCTTTGTCATGCCTGTTCGACTTGTTGGAAAGCCGATTTGAAGTCGATAAAGT
GCTCGCGCTTTTAGAAACCGCACCCGTGTTGCGCCGTTTCGGACTGACTGAGGACGATTTGCCGCTTTTGCACGACATGG
TTGCCGATTTGAACGTCCGCTGGGGTTTGGACGGAGAAATGCGCGGCGGCACGGATCAGCTGTTCACCTGGAAGCAGGCG
GTAGAACGCATGATATTGGGCTGGATGCTGCCCGAAGGCGGCAACCCGATGTGGCAGGATGTCAGCGCGTGGTATGCCGA
CGTGAACCAAACCGCCCTGTTCGGACGTTTTGCCGCCTTCCTCGAAACCCTGACGGATATTGTACGGATATGGCGGCAGC
CCGCAACGGTTGATGAATGGGTAGGACGTTGCCGAGGTTTGCTTAAAACATTGTTCCAAGCCGAAGCCGATGACCAAAAG
GCAGTCCAAAACCTCGAAAACGAATGGGTCAAATGGCAGGCGGAAACCGAATTGGCGCAATTTTCCGGACAGTTGCCGCA
ACAAACCGTCATCCGTCACATCCGCCGCTTCCTCGACAGCGAAAGTGAGGCAGGCTTTTTACGCGGCGGCATCACTTTTT
GCAGTATGGTGCCGATGCGCAGCCTGCCGTTCAAAGTCATCTGCCTGTTGGGTTTGAACGACGGAGATTTTCCCCGCAAT
ACCAAAGCCGCCGTATTCGACCTGATTGCCAAACATCCCGCCAAAGGCGACCGCGCCCGCCGCGACGACGACCGCTACCT
CTTCCTCGAAGCCCTCATCAGCGCGCGTGAAATCCTGTACCTGTCCTACATCGGGCGCGACATCCGCAAAGACGAAGAAC
TGGCTCCGTCTTCTTTGTTGGGCGAACTCATCGACACAGTTGCCGCCATGACCGGCACAAACAGCCGCCAACTTGCACAA
AACCTGATAGAACAGCATCCGCTGCAAGCCTTCTCGCGCCGATATTTTCAAGAAGGCGGACGTTCAGACGGCATATTCGG
CACGCGTACCGACTACGCCGCCGCGCTCGGACAAACGCCCGAACCGCCGCAACCCTTTTTCGATCAACCCGTAGAAAACG
CCGAACCTGTTGCCGAAATCGGACAGGACGAATTTATCCGCTTCTGGCGCAACCCTGTCAAAGTATGGCTTCAGCAGCAG
CTTGCGTGGAGCGAACCCCATATCGGCGAAGCCTGGGAGCCTGCCGAACCCTTCGAGCCGCAACACGCCGATCAAATCGC
CGAAATCTACATCGAAGCACGGCGCGAAGGACGGGATTTTGCCCAAACCGCCGCCCGCATCGGGGCGGAAAGCCTCCTGC
CGTCGGGAGAGTTGGGCAGACTTTGGCAGCAGGACTTCCAAACTGCTGCCAAACAAATCGACACGGCGGTTTTAAACAGC
CCCAAACTGCCACCGCTTTCATATGCCATACCGTCGGACGGGCAAATCCTGAAAGGCAGCTTGGGCAATCTGTACCGCTG
CGGACAAGTGTTTTACGCCTACGGCAAACCCAACGCGCCGCAACGTATCGCTTTTCTGCTGGAACACCTGATATTTTGCG
CCGTTATGCCGTCTGAAGCCGAAATGCGGCAAACCTTTATCGTCCAATCCGGAGAAACCGAAATATTGGCGGAAATCGCG
CAAGACAGGGCATTGCAGCTATTGTCGGAATGGATGGCGTTTTTCAATATCGGGCAAAACCGCCCGCTGCCGTTTTTTGC
CAAAACCTCGCTTGCCACCGCCGAAGCGTTTGTCCAAAAACAAGATTGGGAAGCCGCCCTGAAAAAAGCCCAAACCGCCT
ACCACGGCAGCAAAGTCAGCAAAGGGCAGAAAGACTATACCGAAGTCGCCCTCGTGTTCGGCAACGCAAGCCAAAACCCG
CTCGAACAGCCCCTGTTTGAAAACCTCGTCCGTCTGCTTGCCGACACGCTTGCCGCAGCGGAAAAAAAGGAAGAGGCCGG
AGAAGCCTGA

Domains

Predicted by InterproScan.

Exodeoxyribonuclease V, gamma subunit (Exonuc_V_gamma)

(2-312)

RecC C-terminal domain (RecC_C)

(778-996)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB X5F904

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recC Neisseria gonorrhoeae strain FA1090

93.545

100

0.935

Multiple sequence alignment