Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | CY96_RS26430 | Genome accession | NZ_CP007512 |
| Coordinates | 5185451..5185735 (-) | Length | 94 a.a. |
| NCBI ID | WP_000843036.1 | Uniprot ID | A0A9W5VII1 |
| Organism | Bacillus bombysepticus str. Wang | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 5180451..5190735
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CY96_RS26395 (CY96_26740) | tmk | 5180643..5181269 (+) | 627 | WP_000677214.1 | dTMP kinase | - |
| CY96_RS26400 (CY96_26745) | holB | 5181305..5182288 (+) | 984 | WP_000169563.1 | DNA polymerase III subunit delta' | - |
| CY96_RS26405 (CY96_26750) | - | 5182294..5183121 (+) | 828 | WP_000272429.1 | stage 0 sporulation family protein | - |
| CY96_RS26410 (CY96_26755) | yabA | 5183136..5183486 (+) | 351 | WP_000412063.1 | DNA replication initiation control protein YabA | - |
| CY96_RS26415 (CY96_26760) | - | 5183569..5184309 (+) | 741 | WP_001055367.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| CY96_RS26420 (CY96_26765) | - | 5184296..5184586 (+) | 291 | WP_000414350.1 | GIY-YIG nuclease family protein | - |
| CY96_RS26425 (CY96_26770) | rsmI | 5184555..5185430 (+) | 876 | WP_000267820.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| CY96_RS26430 (CY96_26775) | abrB | 5185451..5185735 (-) | 285 | WP_000843036.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| CY96_RS26435 (CY96_26780) | metG | 5186193..5188202 (+) | 2010 | WP_071699964.1 | methionine--tRNA ligase | - |
| CY96_RS26440 (CY96_26785) | - | 5188368..5189135 (+) | 768 | WP_000895843.1 | TatD family hydrolase | - |
| CY96_RS26445 (CY96_26790) | rnmV | 5189350..5189907 (+) | 558 | WP_000692835.1 | ribonuclease M5 | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10490.17 Da Isoelectric Point: 4.7174
>NTDB_id=120236 CY96_RS26430 WP_000843036.1 5185451..5185735(-) (abrB) [Bacillus bombysepticus str. Wang]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=120236 CY96_RS26430 WP_000843036.1 5185451..5185735(-) (abrB) [Bacillus bombysepticus str. Wang]
ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGACGCTCTTGAAATCTATGTTGATGACGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGACGGTAACCTTTCTTTAGCTGAAGGTAAAATCATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGACGCTCTTGAAATCTATGTTGATGACGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGACGGTAACCTTTCTTTAGCTGAAGGTAAAATCATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
85.106 |
100 |
0.851 |