Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   CY96_RS05095 Genome accession   NZ_CP007512
Coordinates   1008314..1008997 (+) Length   227 a.a.
NCBI ID   WP_000350708.1    Uniprot ID   A0A9W3KUB1
Organism   Bacillus bombysepticus str. Wang     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1003314..1013997
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CY96_RS05070 (CY96_05150) - 1004376..1006022 (+) 1647 WP_000727250.1 peptide ABC transporter substrate-binding protein -
  CY96_RS05075 (CY96_05155) - 1006052..1006255 (-) 204 WP_000559971.1 hypothetical protein -
  CY96_RS05085 (CY96_05160) spx 1006849..1007244 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  CY96_RS05090 (CY96_05165) - 1007294..1007968 (-) 675 WP_000362615.1 TerC family protein -
  CY96_RS05095 (CY96_05170) mecA 1008314..1008997 (+) 684 WP_000350708.1 adaptor protein MecA Regulator
  CY96_RS05100 (CY96_05175) - 1009070..1010614 (+) 1545 WP_000799188.1 cardiolipin synthase -
  CY96_RS05105 (CY96_05180) - 1010695..1011939 (+) 1245 WP_000628327.1 competence protein CoiA family protein -
  CY96_RS05110 (CY96_05185) pepF 1011991..1013817 (+) 1827 WP_000003348.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 27023.10 Da        Isoelectric Point: 3.9986

>NTDB_id=120201 CY96_RS05095 WP_000350708.1 1008314..1008997(+) (mecA) [Bacillus bombysepticus str. Wang]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELIEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFENRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=120201 CY96_RS05095 WP_000350708.1 1008314..1008997(+) (mecA) [Bacillus bombysepticus str. Wang]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAGATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGACGGGCAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAGCAAGAATTAATCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGAACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTATTTTAGAATATGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.14

100

0.564


Multiple sequence alignment