Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   GBS85147_RS05780 Genome accession   NZ_CP010319
Coordinates   1138722..1139204 (-) Length   160 a.a.
NCBI ID   WP_000163512.1    Uniprot ID   Q8DZB3
Organism   Streptococcus agalactiae strain GBS85147     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1133722..1144204
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GBS85147_RS05760 (GBS85147_1171) alsS 1133981..1135663 (-) 1683 WP_000140344.1 acetolactate synthase AlsS -
  GBS85147_RS05765 (GBS85147_1172) - 1135773..1136999 (-) 1227 WP_000934874.1 hypothetical protein -
  GBS85147_RS05770 (GBS85147_1173) - 1136989..1138179 (-) 1191 WP_001081531.1 AI-2E family transporter -
  GBS85147_RS05775 (GBS85147_1174) - 1138271..1138732 (-) 462 WP_000796044.1 NUDIX hydrolase -
  GBS85147_RS05780 (GBS85147_1175) mutX 1138722..1139204 (-) 483 WP_000163512.1 8-oxo-dGTP diphosphatase Machinery gene
  GBS85147_RS05785 (GBS85147_1176) hylB 1139422..1142655 (+) 3234 WP_017646963.1 hyaluronate lyase -
  GBS85147_RS05790 (GBS85147_1177) rfbB 1142707..1143753 (-) 1047 WP_000134280.1 dTDP-glucose 4,6-dehydratase -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18837.23 Da        Isoelectric Point: 4.5116

>NTDB_id=120089 GBS85147_RS05780 WP_000163512.1 1138722..1139204(-) (mutX) [Streptococcus agalactiae strain GBS85147]
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=120089 GBS85147_RS05780 WP_000163512.1 1138722..1139204(-) (mutX) [Streptococcus agalactiae strain GBS85147]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGCACCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAGTGGATCTCGGTAGGCGGTAAACTGGAGGCAGGTGAAACTCCTGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACAGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACTTT
AGAATGGGTACCATATGATCAAGTTCTCTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DZB3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.698

99.375

0.712

Multiple sequence alignment