Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   GBS85147_RS04625 Genome accession   NZ_CP010319
Coordinates   911164..911832 (+) Length   222 a.a.
NCBI ID   WP_000076365.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain GBS85147     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 906164..916832
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GBS85147_RS04605 (GBS85147_0933) - 906703..907191 (-) 489 WP_001140790.1 PASTA domain-containing protein -
  GBS85147_RS04610 (GBS85147_0934) - 907357..908319 (+) 963 WP_001253128.1 S41 family peptidase -
  GBS85147_RS04615 (GBS85147_0935) - 908345..909097 (+) 753 WP_000923535.1 ABC transporter ATP-binding protein -
  GBS85147_RS04620 (GBS85147_0936) - 909099..911054 (+) 1956 WP_000499554.1 FtsX-like permease family protein -
  GBS85147_RS04625 (GBS85147_0937) braR 911164..911832 (+) 669 WP_000076365.1 response regulator transcription factor Regulator
  GBS85147_RS04630 (GBS85147_0938) - 911829..912767 (+) 939 WP_000620977.1 HAMP domain-containing sensor histidine kinase -
  GBS85147_RS04635 (GBS85147_0939) xerS 912810..913880 (-) 1071 WP_000817926.1 tyrosine recombinase XerS Machinery gene
  GBS85147_RS04640 (GBS85147_0940) - 914332..915993 (+) 1662 WP_000093971.1 peptide ABC transporter substrate-binding protein -
  GBS85147_RS04645 (GBS85147_0941) - 916026..916799 (-) 774 WP_000622403.1 DUF3307 domain-containing protein -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25331.39 Da        Isoelectric Point: 5.3008

>NTDB_id=120080 GBS85147_RS04625 WP_000076365.1 911164..911832(+) (braR) [Streptococcus agalactiae strain GBS85147]
MSQDQGKIYIVEDDMTIVSLLKGHLSASYHVSSVSNFRDVKQEIIAFQPDLILMDITLPYFNGFYWTAELRKFLTIPIIF
ISSSNDEMDMVMALNMGGDDFISKPFSLAVLDAKLTAILRRSQQFIQQELTFGGFTLTREGLLSSQDKEVILSPTENKIL
SILLMHPKQVVSKESLLEKLWENDSFIDQNTLNVNMTRLRKKIVPIGFDYIHTVRGVGYLLQ

Nucleotide


Download         Length: 669 bp        

>NTDB_id=120080 GBS85147_RS04625 WP_000076365.1 911164..911832(+) (braR) [Streptococcus agalactiae strain GBS85147]
ATGTCACAAGATCAAGGAAAAATTTATATTGTAGAAGATGATATGACGATTGTGTCACTTTTAAAAGGCCATTTATCAGC
TAGCTATCATGTCTCTAGTGTCAGCAATTTTCGTGATGTGAAACAAGAAATTATCGCATTTCAACCCGATTTGATACTAA
TGGATATTACGTTACCCTATTTTAATGGTTTTTACTGGACTGCAGAATTGCGTAAGTTTTTAACAATTCCTATTATTTTC
ATTTCATCTAGTAATGATGAAATGGATATGGTTATGGCATTAAATATGGGGGGTGATGACTTTATTTCAAAACCATTCTC
TCTAGCTGTATTAGATGCTAAGCTAACTGCTATTTTAAGGAGAAGTCAACAATTTATCCAACAGGAATTAACTTTTGGGG
GATTTACGTTGACAAGAGAAGGGTTATTGTCTAGCCAAGATAAAGAGGTTATTTTATCGCCAACAGAAAATAAAATCCTA
TCTATCTTGCTCATGCATCCTAAACAAGTAGTCTCAAAAGAGTCTCTATTAGAGAAACTTTGGGAAAATGATAGTTTTAT
TGATCAAAATACACTTAATGTTAATATGACACGCTTACGTAAAAAAATTGTCCCAATAGGTTTTGATTACATTCATACAG
TGAGAGGAGTAGGGTATTTACTACAATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(8-115)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.248

98.198

0.464

Multiple sequence alignment