Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX   Type   Regulator
Locus tag   ZY05719_RS00420 Genome accession   NZ_CP007497
Coordinates   71441..71707 (+) Length   88 a.a.
NCBI ID   WP_014635810.1    Uniprot ID   A0A2K1SXG9
Organism   Streptococcus suis strain ZY05719 isolate diseased pig     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 66441..76707
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ZY05719_RS00385 (ZY05719_00395) cinA 66447..67628 (+) 1182 WP_012774894.1 competence/damage-inducible protein A Machinery gene
  ZY05719_RS00390 (ZY05719_00400) recA 67680..68831 (+) 1152 WP_011922545.1 recombinase RecA Machinery gene
  ZY05719_RS00395 (ZY05719_00405) spx 69067..69465 (+) 399 WP_002939362.1 transcriptional regulator Spx -
  ZY05719_RS00400 (ZY05719_00410) - 69565..69831 (+) 267 WP_002939360.1 IreB family regulatory phosphoprotein -
  ZY05719_RS00405 (ZY05719_00415) ruvX 69831..70250 (+) 420 WP_002939356.1 Holliday junction resolvase RuvX -
  ZY05719_RS00410 (ZY05719_00420) - 70262..70582 (+) 321 WP_002939343.1 DUF1292 domain-containing protein -
  ZY05719_RS00415 (ZY05719_00425) - 70790..71368 (+) 579 WP_012774895.1 nucleotidyltransferase family protein -
  ZY05719_RS00420 (ZY05719_00430) comX/sigX 71441..71707 (+) 267 WP_014635810.1 hypothetical protein Regulator
  ZY05719_RS00425 (ZY05719_00435) rpsJ 72031..72339 (+) 309 WP_011922546.1 30S ribosomal protein S10 -
  ZY05719_RS00430 (ZY05719_00440) rplC 72436..73062 (+) 627 WP_011921686.1 50S ribosomal protein L3 -
  ZY05719_RS00435 (ZY05719_00445) rplD 73087..73710 (+) 624 WP_004195490.1 50S ribosomal protein L4 -
  ZY05719_RS00440 (ZY05719_00450) - 73710..74009 (+) 300 WP_004195491.1 50S ribosomal protein L23 -
  ZY05719_RS00445 (ZY05719_00455) rplB 74027..74860 (+) 834 WP_002936663.1 50S ribosomal protein L2 -
  ZY05719_RS00450 (ZY05719_00460) rpsS 75111..75392 (+) 282 WP_000533766.1 30S ribosomal protein S19 -
  ZY05719_RS00455 (ZY05719_00465) rplV 75410..75754 (+) 345 WP_002936662.1 50S ribosomal protein L22 -
  ZY05719_RS00460 (ZY05719_00470) rpsC 75767..76420 (+) 654 WP_002936661.1 30S ribosomal protein S3 -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 10670.50 Da        Isoelectric Point: 9.1949

>NTDB_id=119943 ZY05719_RS00420 WP_014635810.1 71441..71707(+) (comX/sigX) [Streptococcus suis strain ZY05719 isolate diseased pig]
MEFETVCLKVRNLGRLYCYFKVKFRTHIEAIIRKQESQKCKFDRLLHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN

Nucleotide


Download         Length: 267 bp        

>NTDB_id=119943 ZY05719_RS00420 WP_014635810.1 71441..71707(+) (comX/sigX) [Streptococcus suis strain ZY05719 isolate diseased pig]
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAACCCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCCTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2K1SXG9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comX/sigX Streptococcus suis D9

72.603

82.955

0.602
  comX/sigX Streptococcus suis isolate S10

71.233

82.955

0.591
  comX/sigX Streptococcus suis P1/7

71.233

82.955

0.591

Multiple sequence alignment