Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   Q433_RS07580 Genome accession   NZ_CP007409
Coordinates   1436478..1437053 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1431478..1442053
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q433_RS07550 (Q433_08125) dapD 1431665..1432375 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  Q433_RS07555 (Q433_08130) dapI 1432445..1433569 (+) 1125 WP_021479383.1 N-acetyldiaminopimelate deacetylase -
  Q433_RS07560 (Q433_08135) ykuS 1433631..1433876 (+) 246 WP_003232382.1 YkuS family protein -
  Q433_RS07565 (Q433_08140) mscT 1433913..1434716 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  Q433_RS07570 (Q433_08145) ahpA 1434953..1435495 (+) 543 WP_038427629.1 biofilm-specific peroxidase AhpA -
  Q433_RS07575 (Q433_08150) ykuV 1435566..1436012 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  Q433_RS07580 (Q433_08160) rok 1436478..1437053 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  Q433_RS07585 (Q433_08165) cse15 1437094..1438059 (-) 966 WP_038427630.1 spore protein Cse15 -
  Q433_RS07590 (Q433_08170) mobA 1438196..1438795 (+) 600 WP_021479380.1 molybdenum cofactor guanylyltransferase -
  Q433_RS07595 moeB 1438846..1439865 (+) 1020 WP_017696813.1 molybdopterin-synthase adenylyltransferase MoeB -
  Q433_RS07600 (Q433_08185) glp 1439883..1441175 (+) 1293 WP_038427631.1 gephyrin-like molybdotransferase Glp -
  Q433_RS07605 (Q433_08190) mobB 1441136..1441657 (+) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=119208 Q433_RS07580 WP_003232378.1 1436478..1437053(+) (rok) [Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=119208 Q433_RS07580 WP_003232378.1 1436478..1437053(+) (rok) [Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment