Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   Q433_RS06070 Genome accession   NZ_CP007409
Coordinates   1172368..1173519 (+) Length   383 a.a.
NCBI ID   WP_029726275.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1167368..1178519
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q433_RS06045 (Q433_06480) yjbB 1168041..1169258 (+) 1218 WP_010886478.1 MFS transporter -
  Q433_RS06050 (Q433_06485) yjbC 1169422..1170000 (+) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  Q433_RS06055 (Q433_06490) spx 1170181..1170576 (+) 396 WP_003245483.1 transcriptional regulator Spx -
  Q433_RS06060 (Q433_06495) yjbE 1170619..1171275 (-) 657 WP_003232944.1 TerC family protein -
  Q433_RS21470 - 1171445..1171585 (+) 141 WP_121572562.1 hypothetical protein -
  Q433_RS06065 (Q433_06500) mecA 1171552..1172208 (+) 657 WP_015383354.1 adaptor protein MecA Regulator
  Q433_RS21475 - 1172203..1172324 (-) 122 Protein_1134 hypothetical protein -
  Q433_RS06070 (Q433_06510) coiA 1172368..1173519 (+) 1152 WP_029726275.1 competence protein CoiA Machinery gene
  Q433_RS06075 (Q433_06515) pepF 1173749..1175578 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  Q433_RS06080 (Q433_06520) - 1175616..1175783 (-) 168 WP_003244944.1 hypothetical protein -
  Q433_RS06090 (Q433_06530) spxH 1176098..1176997 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  Q433_RS06095 (Q433_06535) bhbI 1176994..1177392 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  Q433_RS06100 (Q433_06540) cwlQ 1177647..1178381 (-) 735 WP_029726274.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44801.93 Da        Isoelectric Point: 10.0034

>NTDB_id=119203 Q433_RS06070 WP_029726275.1 1172368..1173519(+) (coiA) [Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFIRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=119203 Q433_RS06070 WP_029726275.1 1172368..1173519(+) (coiA) [Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTTGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCAGACGTCATGGCAAGGATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTATCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAATTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAGCGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGTGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.928

97.389

0.963


Multiple sequence alignment