Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   Q433_RS04425 Genome accession   NZ_CP007409
Coordinates   868155..868949 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 863155..873949
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q433_RS04395 (Q433_04720) sxzA 863994..865025 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  Q433_RS04400 (Q433_04725) yfhB 865140..866021 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  Q433_RS04405 (Q433_04730) yfhC 866109..866693 (+) 585 WP_003243940.1 nitroreductase -
  Q433_RS04410 (Q433_04735) yfhD 866729..866923 (-) 195 WP_038427536.1 YfhD family protein -
  Q433_RS04415 yfhE 866990..867100 (-) 111 WP_003223230.1 YfhE family protein -
  Q433_RS04420 (Q433_04745) yfhF 867155..868066 (-) 912 WP_038427537.1 TIGR01777 family oxidoreductase -
  Q433_RS04425 (Q433_04750) recX 868155..868949 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  Q433_RS04430 (Q433_04755) yfhH 868951..869271 (+) 321 WP_029726843.1 YfhH family protein -
  Q433_RS04440 (Q433_04765) yfhI 869408..870601 (+) 1194 WP_072692836.1 MFS transporter -
  Q433_RS04445 (Q433_04770) sspK 870633..870785 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  Q433_RS04450 (Q433_04775) yfhJ 870910..871179 (+) 270 WP_003243789.1 YfhJ family protein -
  Q433_RS04455 (Q433_04780) yfhK 871324..871842 (+) 519 WP_029726841.1 SH3 domain-containing protein -
  Q433_RS04460 (Q433_04785) spdL 871927..872244 (+) 318 WP_032679045.1 SdpC immunity protein SpdL -
  Q433_RS04465 (Q433_04790) ephM 872246..873106 (+) 861 WP_038427538.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=119190 Q433_RS04425 WP_029726844.1 868155..868949(+) (recX) [Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=119190 Q433_RS04425 WP_029726844.1 868155..868949(+) (recX) [Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAAATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment