Detailed information NTG0118754

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: RG71_RS08535
• Genome accession: NZ_CP010237
• Coordinates: 1624966..1625991 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain S43
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1619966..1630991

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RG71_RS08515 (RG71_07820)	metJ	1621027..1621344 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
RG71_RS08520 (RG71_07825)	yiiX	1621528..1622136 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
RG71_RS08525 (RG71_07830)	rpmE	1622197..1622409 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
RG71_RS08530 (RG71_07835)	priA	1622612..1624810 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
RG71_RS08535 (RG71_07840)	cytR	1624966..1625991 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
RG71_RS08540 (RG71_07845)	ftsN	1626083..1627042 (+)	960	WP_000068828.1	cell division protein FtsN	-
RG71_RS08545 (RG71_07850)	hslV	1627135..1627665 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
RG71_RS08550 (RG71_07855)	hslU	1627675..1629006 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
RG71_RS08555 (RG71_07860)	menA	1629073..1629999 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
RG71_RS08560 (RG71_07865)	rraA	1630092..1630577 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
RG71_RS08565 (RG71_07870)	zapB	1630662..1630907 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=118754 RG71_RS08535 WP_000644904.1 1624966..1625991(+) (cytR) [Escherichia coli strain S43]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=118754 RG71_RS08535 WP_000644904.1 1624966..1625991(+) (cytR) [Escherichia coli strain S43]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628