Detailed information
Bioinformatically predicted
Overview
| Name | sxy/tfoX | Type | Regulator |
| Locus tag | NMECO18_RS00410 | Genome accession | NZ_CP007275 |
| Coordinates | 85672..86301 (+) | Length | 209 a.a. |
| NCBI ID | WP_000839136.1 | Uniprot ID | A0A0D8W3X3 |
| Organism | Escherichia coli strain O18 | ||
| Function | positive regulator of competence gene (predicted from homology) Competence regulation |
||
Genomic Context
Location: 80672..91301
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMECO18_RS00385 (NMECO18_00460) | ycbZ | 81073..82833 (-) | 1761 | WP_000156501.1 | Lon protease family protein | - |
| NMECO18_RS00390 (NMECO18_00465) | matP | 83019..83471 (+) | 453 | WP_000877153.1 | macrodomain Ter protein MatP | - |
| NMECO18_RS00395 (NMECO18_00470) | ompA | 83549..84589 (-) | 1041 | WP_001350588.1 | porin OmpA | - |
| NMECO18_RS00405 (NMECO18_00485) | sulA | 84944..85453 (-) | 510 | WP_000287750.1 | SOS-induced cell division inhibitor SulA | - |
| NMECO18_RS00410 (NMECO18_00490) | sxy/tfoX | 85672..86301 (+) | 630 | WP_000839136.1 | CRP-S regulon transcriptional coactivator Sxy | Regulator |
| NMECO18_RS00415 (NMECO18_00495) | yccS | 86264..88426 (-) | 2163 | WP_000875041.1 | YccS family putative transporter | - |
| NMECO18_RS00420 (NMECO18_00500) | yccF | 88436..88882 (-) | 447 | WP_001261236.1 | YccF domain-containing protein | - |
| NMECO18_RS00425 (NMECO18_00505) | helD | 89005..91059 (+) | 2055 | WP_001350178.1 | DNA helicase IV | - |
Sequence
Protein
Download Length: 209 a.a. Molecular weight: 24128.06 Da Isoelectric Point: 9.2180
>NTDB_id=118740 NMECO18_RS00410 WP_000839136.1 85672..86301(+) (sxy/tfoX) [Escherichia coli strain O18]
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAPYCVKHPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNIRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAPYCVKHPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNIRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
Nucleotide
Download Length: 630 bp
>NTDB_id=118740 NMECO18_RS00410 WP_000839136.1 85672..86301(+) (sxy/tfoX) [Escherichia coli strain O18]
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGTAGTTACAGCCTGACCGTTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACCGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAT
TACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCT
GAAAGAGAAAAGTACGCGCAATATTCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
AGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGGGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACG
CCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGTAGTTACAGCCTGACCGTTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACCGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAT
TACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCT
GAAAGAGAAAAGTACGCGCAATATTCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
AGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGGGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACG
CCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sxy/tfoX | Escherichia coli BW25113 strain K-12 |
99.043 |
100 |
0.99 |