Detailed information NTG0118347

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: RG66_RS06855
• Genome accession: NZ_CP010229
• Coordinates: 1358193..1359218 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain S10
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1353193..1364218

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RG66_RS06830 (RG66_06575)	metJ	1353754..1354071 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
RG66_RS06835 (RG66_06580)	yiiX	1354131..1354739 (+)	609	WP_001402675.1	YiiX family permuted papain-like enzyme	-
RG66_RS06840 (RG66_06585)	-	1354746..1355369 (+)	624	WP_001402674.1	TIGR02117 family protein	-
RG66_RS06845 (RG66_06590)	rpmE	1355424..1355636 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
RG66_RS06850 (RG66_06595)	priA	1355839..1358037 (+)	2199	WP_001298972.1	primosomal protein N'	Machinery gene
RG66_RS06855 (RG66_06600)	cytR	1358193..1359218 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
RG66_RS06860 (RG66_06605)	ftsN	1359310..1360269 (+)	960	WP_000068834.1	cell division protein FtsN	-
RG66_RS06865 (RG66_06610)	hslV	1360362..1360892 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
RG66_RS06870 (RG66_06615)	hslU	1360902..1362233 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
RG66_RS06875 (RG66_06620)	menA	1362300..1363226 (+)	927	WP_001307494.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
RG66_RS06880 (RG66_06625)	rraA	1363319..1363804 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
RG66_RS06885 (RG66_06630)	zapB	1363889..1364134 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=118347 RG66_RS06855 WP_000644904.1 1358193..1359218(+) (cytR) [Escherichia coli strain S10]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=118347 RG66_RS06855 WP_000644904.1 1358193..1359218(+) (cytR) [Escherichia coli strain S10]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628