Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AJ82_RS02055 Genome accession   NZ_CP007244
Coordinates   408511..409464 (+) Length   317 a.a.
NCBI ID   WP_025284229.1    Uniprot ID   -
Organism   Bacillus velezensis TrigoCor1448     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 403511..414464
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AJ82_RS02035 (AJ82_02190) - 403557..404990 (+) 1434 WP_163113845.1 HAMP domain-containing sensor histidine kinase -
  AJ82_RS02040 (AJ82_02200) rapC 405143..406291 (+) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  AJ82_RS02045 (AJ82_02205) phrC 406275..406394 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  AJ82_RS19195 - 406543..406638 (-) 96 WP_012116800.1 YjcZ family sporulation protein -
  AJ82_RS02050 (AJ82_02220) - 406733..408097 (-) 1365 WP_025284228.1 aspartate kinase -
  AJ82_RS02055 (AJ82_02235) ceuB 408511..409464 (+) 954 WP_025284229.1 ABC transporter permease Machinery gene
  AJ82_RS02060 (AJ82_02240) - 409454..410401 (+) 948 WP_007410274.1 iron chelate uptake ABC transporter family permease subunit -
  AJ82_RS02065 (AJ82_02245) - 410395..411153 (+) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  AJ82_RS02070 (AJ82_02250) - 411175..412119 (+) 945 WP_025284230.1 siderophore ABC transporter substrate-binding protein -
  AJ82_RS02075 (AJ82_02255) - 412161..413585 (-) 1425 WP_025284231.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34959.26 Da        Isoelectric Point: 9.6741

>NTDB_id=118202 AJ82_RS02055 WP_025284229.1 408511..409464(+) (ceuB) [Bacillus velezensis TrigoCor1448]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNLGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=118202 AJ82_RS02055 WP_025284229.1 408511..409464(+) (ceuB) [Bacillus velezensis TrigoCor1448]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCGGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGATTGGGCAAGGCTCGGAATCTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATATGACCTGATC
CAAAACCTGTCGTCTTGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTTTTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATCTCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

54.114

99.685

0.539

Multiple sequence alignment