Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   STAB904_RS08315 Genome accession   NZ_CP007241
Coordinates   1711833..1712546 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus pyogenes strain 1E1     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1706833..1717546
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STAB904_RS08305 (STAB904_09320) treC 1707903..1709531 (-) 1629 WP_038434329.1 alpha,alpha-phosphotrehalase -
  STAB904_RS08310 (STAB904_09325) treP 1709598..1711622 (-) 2025 WP_038434330.1 PTS system trehalose-specific EIIBC component -
  STAB904_RS08315 (STAB904_09330) treR 1711833..1712546 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  STAB904_RS08320 (STAB904_09345) - 1712824..1713107 (-) 284 Protein_1595 winged helix-turn-helix transcriptional regulator -
  STAB904_RS08325 (STAB904_09350) - 1713343..1714200 (+) 858 Protein_1596 VOC family protein -
  STAB904_RS08330 (STAB904_09355) yaaA 1714242..1714973 (+) 732 WP_038434332.1 peroxide stress protein YaaA -
  STAB904_RS08335 (STAB904_09360) nrdG 1715147..1715761 (-) 615 WP_021775544.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  STAB904_RS08340 (STAB904_09365) - 1715761..1716270 (-) 510 WP_011018311.1 GNAT family N-acetyltransferase -
  STAB904_RS08345 (STAB904_09370) - 1716279..1717214 (-) 936 WP_038434333.1 Gfo/Idh/MocA family protein -
  STAB904_RS09390 (STAB904_09375) - 1717243..1717389 (-) 147 WP_023610752.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=118104 STAB904_RS08315 WP_002982243.1 1711833..1712546(+) (treR) [Streptococcus pyogenes strain 1E1]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=118104 STAB904_RS08315 WP_002982243.1 1711833..1712546(+) (treR) [Streptococcus pyogenes strain 1E1]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAGCATCATCAGATCATGTTCCCCATCTCAGAACTAACT
AGCTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment