Detailed information NTG0118063

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: RG62_RS15750
• Genome accession: NZ_CP010219
• Coordinates: 3005130..3006155 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain M18
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3000130..3011155

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RG62_RS15720 (RG62_14885)	zapB	3000214..3000459 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
RG62_RS15725 (RG62_14890)	rraA	3000544..3001029 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
RG62_RS15730 (RG62_14895)	menA	3001122..3002048 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
RG62_RS15735 (RG62_14900)	hslU	3002115..3003446 (-)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
RG62_RS15740 (RG62_14905)	hslV	3003456..3003986 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
RG62_RS15745 (RG62_14910)	ftsN	3004079..3005038 (-)	960	WP_000068834.1	cell division protein FtsN	-
RG62_RS15750 (RG62_14915)	cytR	3005130..3006155 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
RG62_RS15755 (RG62_14920)	priA	3006311..3008509 (-)	2199	WP_001395720.1	primosomal protein N'	Machinery gene
RG62_RS15760 (RG62_14925)	rpmE	3008712..3008924 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
RG62_RS15765 (RG62_14930)	yiiX	3008985..3009593 (-)	609	WP_000797344.1	YiiX family permuted papain-like enzyme	-
RG62_RS15770 (RG62_14935)	metJ	3009777..3010094 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=118063 RG62_RS15750 WP_000644904.1 3005130..3006155(-) (cytR) [Escherichia coli strain M18]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=118063 RG62_RS15750 WP_000644904.1 3005130..3006155(-) (cytR) [Escherichia coli strain M18]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTATCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628