Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   STAB1101_RS06355 Genome accession   NZ_CP007240
Coordinates   1287517..1288242 (-) Length   241 a.a.
NCBI ID   WP_038431527.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 7F7     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1282517..1293242
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STAB1101_RS06320 (STAB1101_06320) rnpM 1282551..1282847 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  STAB1101_RS06325 (STAB1101_06325) nusA 1282863..1284020 (-) 1158 WP_002994325.1 transcription termination factor NusA -
  STAB1101_RS06330 (STAB1101_06330) rimP 1284195..1284731 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  STAB1101_RS06340 (STAB1101_06340) trmB 1284990..1285625 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  STAB1101_RS06345 (STAB1101_06345) ccrZ 1285625..1286416 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  STAB1101_RS06350 (STAB1101_06350) - 1286480..1287514 (-) 1035 WP_002994331.1 ABC transporter permease -
  STAB1101_RS06355 (STAB1101_06355) pptA 1287517..1288242 (-) 726 WP_038431527.1 ABC transporter ATP-binding protein Regulator
  STAB1101_RS06360 (STAB1101_06360) - 1288314..1288733 (+) 420 WP_002983376.1 HIT family protein -
  STAB1101_RS06365 (STAB1101_06365) - 1288730..1289086 (+) 357 WP_002988657.1 hypothetical protein -
  STAB1101_RS06370 (STAB1101_06370) brpA 1289197..1290480 (-) 1284 WP_002983372.1 biofilm formation/cell division transcriptional regulator BrpA -
  STAB1101_RS06375 (STAB1101_06375) - 1290489..1291013 (-) 525 WP_038431530.1 GNAT family N-acetyltransferase -
  STAB1101_RS06380 (STAB1101_06380) tsaE 1290988..1291449 (-) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  STAB1101_RS06385 (STAB1101_06385) - 1291603..1293063 (-) 1461 WP_038431532.1 NCS2 family permease -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26677.80 Da        Isoelectric Point: 4.7191

>NTDB_id=118046 STAB1101_RS06355 WP_038431527.1 1287517..1288242(-) (pptA) [Streptococcus pyogenes strain 7F7]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLKMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=118046 STAB1101_RS06355 WP_038431527.1 1287517..1288242(-) (pptA) [Streptococcus pyogenes strain 7F7]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCTTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGAAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

73.222

99.17

0.726

  pptA Streptococcus thermophilus LMD-9

72.385

99.17

0.718


Multiple sequence alignment