Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | BD33_RS05315 | Genome accession | NZ_CP007193 |
| Coordinates | 1012474..1012776 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain NS4-9-1 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1007474..1017776
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BD33_RS05290 (BD33_05330) | rpsR | 1007836..1008096 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| BD33_RS05295 (BD33_05335) | lon | 1008157..1010532 (-) | 2376 | WP_002858084.1 | endopeptidase La | - |
| BD33_RS05300 (BD33_05340) | - | 1010549..1011196 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| BD33_RS05305 (BD33_05345) | fliW | 1011357..1011746 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| BD33_RS05310 (BD33_05350) | proC | 1011746..1012477 (+) | 732 | WP_002858388.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| BD33_RS05315 (BD33_05355) | ctsT | 1012474..1012776 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| BD33_RS05320 (BD33_05360) | - | 1012773..1013435 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| BD33_RS05325 (BD33_05365) | - | 1013432..1013884 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| BD33_RS05330 (BD33_05370) | hemD | 1013881..1014510 (-) | 630 | WP_002858312.1 | uroporphyrinogen-III synthase | - |
| BD33_RS05335 (BD33_05375) | thiE | 1014488..1015120 (-) | 633 | WP_002858441.1 | thiamine phosphate synthase | - |
| BD33_RS05340 (BD33_05380) | thiD | 1015110..1015922 (-) | 813 | WP_002858043.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| BD33_RS05345 (BD33_05385) | - | 1015919..1016605 (-) | 687 | WP_002858132.1 | endonuclease III domain-containing protein | - |
| BD33_RS05350 (BD33_05390) | - | 1016602..1017363 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=117368 BD33_RS05315 WP_002853046.1 1012474..1012776(+) (ctsT) [Campylobacter jejuni strain NS4-9-1]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=117368 BD33_RS05315 WP_002853046.1 1012474..1012776(+) (ctsT) [Campylobacter jejuni strain NS4-9-1]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |