Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | BD30_RS05320 | Genome accession | NZ_CP007191 |
| Coordinates | 1012481..1012783 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain NS4-1-1 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1007481..1017783
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BD30_RS05295 (BD30_05330) | rpsR | 1007843..1008103 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| BD30_RS05300 (BD30_05335) | lon | 1008164..1010539 (-) | 2376 | WP_002858084.1 | endopeptidase La | - |
| BD30_RS05305 (BD30_05340) | - | 1010556..1011203 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| BD30_RS05310 (BD30_05345) | fliW | 1011364..1011753 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| BD30_RS05315 (BD30_05350) | proC | 1011753..1012484 (+) | 732 | WP_002858388.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| BD30_RS05320 (BD30_05355) | ctsT | 1012481..1012783 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| BD30_RS05325 (BD30_05360) | - | 1012780..1013442 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| BD30_RS05330 (BD30_05365) | - | 1013439..1013891 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| BD30_RS05335 (BD30_05370) | hemD | 1013888..1014517 (-) | 630 | WP_002858312.1 | uroporphyrinogen-III synthase | - |
| BD30_RS05340 (BD30_05375) | thiE | 1014495..1015127 (-) | 633 | WP_002858441.1 | thiamine phosphate synthase | - |
| BD30_RS05345 (BD30_05380) | thiD | 1015117..1015929 (-) | 813 | WP_002858043.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| BD30_RS05350 (BD30_05385) | - | 1015926..1016612 (-) | 687 | WP_002858132.1 | endonuclease III domain-containing protein | - |
| BD30_RS05355 (BD30_05390) | - | 1016609..1017370 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=117314 BD30_RS05320 WP_002853046.1 1012481..1012783(+) (ctsT) [Campylobacter jejuni strain NS4-1-1]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=117314 BD30_RS05320 WP_002853046.1 1012481..1012783(+) (ctsT) [Campylobacter jejuni strain NS4-1-1]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |