Detailed information
Bioinformatically predicted
Overview
| Name | Cj0683 | Type | Machinery gene |
| Locus tag | BD30_RS03380 | Genome accession | NZ_CP007191 |
| Coordinates | 636157..636594 (+) | Length | 145 a.a. |
| NCBI ID | WP_002852324.1 | Uniprot ID | A0AA44HIV8 |
| Organism | Campylobacter jejuni strain NS4-1-1 | ||
| Function | initialization of DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 631157..641594
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BD30_RS03360 (BD30_03355) | kdpD | 631645..633576 (+) | 1932 | WP_002893651.1 | sensor histidine kinase KdpD | - |
| BD30_RS03365 (BD30_03360) | uvrB | 633571..635544 (-) | 1974 | WP_002856888.1 | excinuclease ABC subunit UvrB | - |
| BD30_RS03370 (BD30_03365) | - | 635698..635928 (+) | 231 | WP_002852327.1 | hypothetical protein | - |
| BD30_RS03375 (BD30_03370) | - | 635918..636160 (+) | 243 | WP_002854947.1 | hypothetical protein | - |
| BD30_RS03380 (BD30_03375) | Cj0683 | 636157..636594 (+) | 438 | WP_002852324.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| BD30_RS03385 (BD30_03380) | priA | 636576..638429 (+) | 1854 | WP_075867336.1 | primosomal protein N' | - |
| BD30_RS03390 (BD30_03385) | cipA | 638439..639833 (-) | 1395 | WP_002893647.1 | DUF2972 domain-containing protein | - |
| BD30_RS03395 (BD30_03390) | ispG | 639979..641052 (+) | 1074 | WP_002854766.1 | flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | - |
Sequence
Protein
Download Length: 145 a.a. Molecular weight: 16765.76 Da Isoelectric Point: 8.0993
>NTDB_id=117311 BD30_RS03380 WP_002852324.1 636157..636594(+) (Cj0683) [Campylobacter jejuni strain NS4-1-1]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI
Nucleotide
Download Length: 438 bp
>NTDB_id=117311 BD30_RS03380 WP_002852324.1 636157..636594(+) (Cj0683) [Campylobacter jejuni strain NS4-1-1]
ATGAATAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCGCAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAACGCGAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGCTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA
ATGAATAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCGCAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAACGCGAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGCTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| Cj0683 | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
100 |
100 |
1 |