Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | BD29_RS05240 | Genome accession | NZ_CP007190 |
| Coordinates | 1017932..1018234 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain HF5-7-1 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1012932..1023234
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BD29_RS05215 (BD29_05205) | rpsR | 1013295..1013555 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| BD29_RS05220 (BD29_05210) | lon | 1013615..1015990 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| BD29_RS05225 (BD29_05215) | - | 1016007..1016654 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| BD29_RS05230 (BD29_05220) | fliW | 1016815..1017204 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| BD29_RS05235 (BD29_05225) | proC | 1017204..1017935 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| BD29_RS05240 (BD29_05230) | ctsT | 1017932..1018234 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| BD29_RS05245 (BD29_05235) | - | 1018231..1018893 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| BD29_RS05250 (BD29_05240) | - | 1018890..1019342 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| BD29_RS05255 (BD29_05245) | hemD | 1019339..1019968 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| BD29_RS05260 (BD29_05250) | thiE | 1019946..1020578 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| BD29_RS05265 (BD29_05255) | thiD | 1020568..1021380 (-) | 813 | WP_002871792.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| BD29_RS05270 (BD29_05260) | - | 1021377..1022063 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| BD29_RS05275 (BD29_05265) | - | 1022060..1022821 (-) | 762 | WP_002871793.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=117287 BD29_RS05240 WP_002853046.1 1017932..1018234(+) (ctsT) [Campylobacter jejuni strain HF5-7-1]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=117287 BD29_RS05240 WP_002853046.1 1017932..1018234(+) (ctsT) [Campylobacter jejuni strain HF5-7-1]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |