Detailed information
Bioinformatically predicted
Overview
| Name | Cj0683 | Type | Machinery gene |
| Locus tag | BD28_RS03285 | Genome accession | NZ_CP007189 |
| Coordinates | 635987..636424 (+) | Length | 145 a.a. |
| NCBI ID | WP_002852324.1 | Uniprot ID | A0AA44HIV8 |
| Organism | Campylobacter jejuni strain HF5-5-1 | ||
| Function | initialization of DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 630987..641424
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BD28_RS03265 (BD28_03260) | kdpD | 631475..633406 (+) | 1932 | WP_002877682.1 | sensor histidine kinase KdpD | - |
| BD28_RS03270 (BD28_03265) | uvrB | 633401..635374 (-) | 1974 | WP_014516973.1 | excinuclease ABC subunit UvrB | - |
| BD28_RS03275 (BD28_03270) | - | 635528..635758 (+) | 231 | WP_002852327.1 | hypothetical protein | - |
| BD28_RS03280 (BD28_03275) | - | 635748..635990 (+) | 243 | WP_002854947.1 | hypothetical protein | - |
| BD28_RS03285 (BD28_03280) | Cj0683 | 635987..636424 (+) | 438 | WP_002852324.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| BD28_RS03290 (BD28_03285) | priA | 636406..638259 (+) | 1854 | WP_002877679.1 | primosomal protein N' | - |
| BD28_RS03295 (BD28_03290) | - | 638252..639010 (-) | 759 | WP_002877674.1 | CTP:phosphoglutamine cytidylyltransferase | - |
| BD28_RS03300 (BD28_03295) | - | 639012..639614 (-) | 603 | WP_002877673.1 | gamma-glutamyl-CDP-amidate hydrolase | - |
Sequence
Protein
Download Length: 145 a.a. Molecular weight: 16765.76 Da Isoelectric Point: 8.0993
>NTDB_id=117257 BD28_RS03285 WP_002852324.1 635987..636424(+) (Cj0683) [Campylobacter jejuni strain HF5-5-1]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI
Nucleotide
Download Length: 438 bp
>NTDB_id=117257 BD28_RS03285 WP_002852324.1 635987..636424(+) (Cj0683) [Campylobacter jejuni strain HF5-5-1]
ATGAATAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCGCAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAACGCCAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGCTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA
ATGAATAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCGCAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAACGCCAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGCTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| Cj0683 | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
100 |
100 |
1 |