Detailed information NTG1171285

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: C7S15_RS17080
• Genome accession: NZ_QXCU01000001
• Coordinates: 3601557..3602711 (+)
• Length: 384 a.a.
• NCBI ID: WP_021163045.1
• Uniprot ID: U2H1M2
• Organism: Burkholderia cepacia strain 10223
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3596557..3607711

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7S15_RS17050 (C7S15_3751)	-	3597202..3597807 (+)	606	WP_021163051.1	50S ribosomal protein L25/general stress protein Ctc	-
C7S15_RS17055 (C7S15_3752)	pth	3597927..3598526 (+)	600	WP_021163050.1	aminoacyl-tRNA hydrolase	-
C7S15_RS17060 (C7S15_3753)	hisC	3598640..3599707 (+)	1068	WP_059811993.1	histidinol-phosphate transaminase	-
C7S15_RS17065 (C7S15_3754)	-	3599792..3600058 (-)	267	WP_318827196.1	YfhL family 4Fe-4S dicluster ferredoxin	-
C7S15_RS17070 (C7S15_3756)	coaD	3600118..3600614 (-)	497	Protein_3339	pantetheine-phosphate adenylyltransferase	-
C7S15_RS17075 (C7S15_3757)	rsmD	3600726..3601340 (-)	615	WP_048025675.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
C7S15_RS17080 (C7S15_3758)	pilA	3601557..3602711 (+)	1155	WP_021163045.1	signal recognition particle-docking protein FtsY	Machinery gene
C7S15_RS17085 (C7S15_3759)	maiA	3602795..3603439 (-)	645	WP_048025676.1	maleylacetoacetate isomerase	-
C7S15_RS17090 (C7S15_3760)	ybiB	3603633..3604607 (+)	975	WP_021163043.1	DNA-binding protein YbiB	-
C7S15_RS17095 (C7S15_3761)	leuA	3604988..3606634 (+)	1647	WP_059489851.1	2-isopropylmalate synthase	-
C7S15_RS17100 (C7S15_3763)	-	3606775..3607158 (-)	384	WP_027789089.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 384 a.a.
• Molecular weight: 40898.82 Da
• Isoelectric Point: 4.8018

>NTDB_id=1171285 C7S15_RS17080 WP_021163045.1 3601557..3602711(+) (pilA) [Burkholderia cepacia strain 10223]
MFSFFKRFKKTQEPDPAESQSADAQQTDEPSDAPAVEAPPAAEVPQAPAQPAAPAVVMTVTPTNDGRDEVVETVEIVPPP
LQDATAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLGALREKVRAGRLTDPQQVKA
ALHDLLVELLTPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERNNV
TVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVISKAHDGAPHEVLLVIDANTGQNALTQ
VKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG

Nucleotide

• Length: 1155 bp

>NTDB_id=1171285 C7S15_RS17080 WP_021163045.1 3601557..3602711(+) (pilA) [Burkholderia cepacia strain 10223]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGATCCGGCGGAATCGCAATCGGCCGACGCGCAGCAAAC
GGACGAACCGTCCGATGCGCCCGCGGTCGAGGCCCCGCCTGCGGCCGAGGTGCCGCAAGCGCCCGCGCAACCGGCCGCGC
CGGCCGTCGTGATGACGGTCACGCCGACCAACGACGGGCGCGACGAAGTCGTCGAGACGGTCGAAATCGTTCCGCCGCCG
CTGCAGGACGCCACCGCGAAGAAATCGTGGCTCGCCCGCCTGAAAACGGGGCTCGCCAAGACGGGCTCGAGCATCACCGG
CGTCTTCGTCAACACGAAGATCGACGAGGATCTGTACGAGGAGCTCGAAACCGCGCTGCTGATGTCCGACGCGGGCGTCG
ACGCGACCGAGTACCTGCTCGGCGCGCTACGCGAAAAGGTGCGCGCGGGCCGCCTGACCGACCCGCAGCAGGTGAAGGCC
GCGCTGCACGACCTGCTCGTCGAGTTGCTGACGCCGCTCGAGAAGTCGCTGATGCTCGGCCGCGCGCAGCCGCTCGTGAT
GATGATCACCGGCGTGAACGGTGCGGGCAAGACGACCAGCATCGGCAAGCTCGCAAAGCATCTGCAGAGCTTCGACCAGT
CGGTGCTGCTGGCCGCGGGCGACACGTTCCGCGCGGCCGCGCGCGAACAGCTGGCGGTCTGGGGCGAGCGCAACAACGTG
ACGGTCGTGCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGCGCGCGCAAGATCGA
CGTGATGATGGCCGACACGGCCGGCCGCCTGCCGACGCAGCTCCACCTGATGGAAGAGCTGAAGAAGGTGAAGCGCGTGA
TCTCGAAGGCGCACGACGGCGCGCCGCACGAAGTGCTGCTGGTGATCGACGCGAACACCGGCCAGAACGCGCTCACGCAG
GTCAAGGCATTCGACGACGCGCTCGGCCTCACCGGCCTCATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGGATTCT
CGCCGCGATCGCGCGGCAGCGCCCGGTGCCGGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGGATCTGCAGCCGTTCA
GCGCGGTCGAATTCGCGGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (102-164)

• SRP54-type protein, GTPase domain (SRP54) (185-384)

3D structure

• AlphaFold DB: U2H1M2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.846	100	0.583