Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   ACOFKY_RS19190 Genome accession   NZ_OZ241355
Coordinates   4113979..4114860 (+) Length   293 a.a.
NCBI ID   WP_336953528.1    Uniprot ID   -
Organism   MAG: Acinetobacter sp. isolate 91b77bb6-a760-4576-a270-dd86adb6cd71     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 4108979..4119860
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACOFKY_RS19160 wrbA 4109226..4109819 (+) 594 WP_419819953.1 NAD(P)H:quinone oxidoreductase -
  ACOFKY_RS19165 - 4109928..4110290 (-) 363 WP_209827964.1 hypothetical protein -
  ACOFKY_RS19170 - 4110514..4111374 (-) 861 WP_419819954.1 acyl-CoA thioesterase -
  ACOFKY_RS19175 - 4111528..4112103 (-) 576 WP_336953525.1 xanthine phosphoribosyltransferase -
  ACOFKY_RS19180 - 4112207..4112911 (-) 705 WP_336953526.1 DUF3108 domain-containing protein -
  ACOFKY_RS19185 - 4113066..4113746 (-) 681 WP_336953527.1 hypothetical protein -
  ACOFKY_RS19190 tonB2 4113979..4114860 (+) 882 WP_336953528.1 TonB family protein Machinery gene
  ACOFKY_RS19195 - 4114945..4115427 (-) 483 WP_336953529.1 ankyrin repeat domain-containing protein -
  ACOFKY_RS19200 - 4115480..4115764 (-) 285 WP_336953530.1 antibiotic biosynthesis monooxygenase -
  ACOFKY_RS19205 - 4115821..4116732 (-) 912 WP_004725806.1 bestrophin family protein -
  ACOFKY_RS19210 radC 4116771..4117493 (-) 723 WP_336953531.1 RadC family protein -
  ACOFKY_RS19215 coaBC 4117608..4118873 (+) 1266 WP_336953532.1 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC -
  ACOFKY_RS19220 - 4119036..4119410 (+) 375 WP_004725812.1 cytochrome b562 -

Sequence

Protein


Download         Length: 293 a.a.        Molecular weight: 33485.83 Da        Isoelectric Point: 6.6652

>NTDB_id=1170802 ACOFKY_RS19190 WP_336953528.1 4113979..4114860(+) (tonB2) [MAG: Acinetobacter sp. isolate 91b77bb6-a760-4576-a270-dd86adb6cd71]
MIKKLFANTEHSEYWWQDSLFVGAVSAAVIAHVLFLSVQFGMPQENNTSTKEIAISIRPSEDEVKDADFLAQSNQQGSGT
FRKEHRISSDMPAQAEDKSAGDQQLEALEQIQQKRELKFEEKVLMTVLSWQKQAEQNDRKKAMEELQSQMQAKTAMVASL
EAQYLQKQQNFSKQQKIKTLDGIQAKQDASAGYLDKFREKVEMYGNRYYPDLAKQQRLSGEVRLMVILNNEGGIRAIRLI
ESSGHSILDEAAKNSVRKGAPFGRFDSKMKDISELRIVRTWRFDPAESEFEVH

Nucleotide


Download         Length: 882 bp        

>NTDB_id=1170802 ACOFKY_RS19190 WP_336953528.1 4113979..4114860(+) (tonB2) [MAG: Acinetobacter sp. isolate 91b77bb6-a760-4576-a270-dd86adb6cd71]
ATGATAAAAAAATTATTTGCCAATACAGAGCATTCTGAGTATTGGTGGCAAGACTCATTATTTGTTGGAGCTGTTTCTGC
AGCTGTCATTGCACATGTACTTTTTTTATCTGTTCAATTTGGAATGCCCCAAGAAAATAATACCAGCACAAAAGAAATCG
CAATCAGTATTCGTCCAAGTGAAGACGAAGTTAAAGATGCAGACTTTTTAGCGCAATCAAATCAGCAGGGTTCAGGAACA
TTCCGTAAAGAGCATCGTATTTCAAGTGATATGCCAGCGCAAGCAGAAGATAAGAGTGCGGGTGATCAGCAACTCGAAGC
TTTAGAACAAATTCAGCAAAAAAGAGAATTGAAATTCGAAGAAAAAGTATTAATGACGGTTCTTAGCTGGCAAAAGCAAG
CGGAACAGAATGATCGCAAAAAGGCCATGGAAGAGTTGCAGAGCCAGATGCAAGCTAAAACGGCAATGGTGGCGAGTCTA
GAAGCTCAATATTTACAGAAACAACAAAATTTTAGTAAACAACAAAAAATTAAAACCTTAGATGGTATTCAAGCCAAGCA
AGATGCATCTGCTGGATATTTAGATAAATTTCGTGAAAAAGTTGAAATGTATGGAAACCGATATTACCCAGATCTTGCCA
AACAGCAGCGTCTTTCGGGGGAAGTCCGTTTAATGGTCATTCTCAATAATGAAGGTGGGATTCGTGCTATACGATTGATT
GAAAGCTCAGGTCATTCAATCCTCGATGAAGCCGCCAAAAACTCAGTGCGTAAAGGTGCACCTTTTGGACGTTTTGACTC
AAAAATGAAAGATATCTCTGAACTGAGGATTGTGCGTACTTGGCGTTTTGACCCAGCTGAATCTGAATTTGAAGTCCACT
GA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(206-283)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

71.429

100

0.717

Multiple sequence alignment