Detailed information NTG0117080

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: AW03_RS18660
• Genome accession: NZ_CP007173
• Coordinates: 3636765..3637910 (+)
• Length: 381 a.a.
• NCBI ID: WP_015384935.1
• Uniprot ID: -
• Organism: Bacillus subtilis HJ5
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3631765..3642910

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AW03_RS18635 (AW03_035890)	albF	3631782..3633063 (+)	1282	Protein_3638	pitrilysin family protein	-
AW03_RS18640 (AW03_035900)	albG	3633060..3633761 (+)	702	WP_015384931.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
AW03_RS18645 (AW03_035910)	ywhL	3633767..3635140 (-)	1374	WP_015483837.1	YncE family protein	-
AW03_RS18650 (AW03_035920)	ywhK	3635180..3636535 (-)	1356	WP_015384933.1	YncE family protein	-
AW03_RS22265	-	3636532..3636762 (-)	231	WP_015483838.1	hypothetical protein	-
AW03_RS18660 (AW03_035930)	rapF	3636765..3637910 (+)	1146	WP_015384935.1	response regulator aspartate phosphatase RapF	Regulator
AW03_RS18665 (AW03_035940)	phrF	3637894..3638013 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
AW03_RS18670 (AW03_035950)	-	3638241..3638717 (+)	477	WP_015384936.1	hypothetical protein	-
AW03_RS18675 (AW03_035960)	-	3638977..3639663 (+)	687	WP_236822444.1	hypothetical protein	-
AW03_RS18690 (AW03_035990)	-	3641139..3641786 (+)	648	WP_015384940.1	ABC transporter ATP-binding protein	-
AW03_RS18695 (AW03_036000)	-	3641779..3642342 (+)	564	WP_015483840.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45617.08 Da
• Isoelectric Point: 5.1503

>NTDB_id=117080 AW03_RS18660 WP_015384935.1 3636765..3637910(+) (rapF) [Bacillus subtilis HJ5]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDHMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=117080 AW03_RS18660 WP_015384935.1 3636765..3637910(+) (rapF) [Bacillus subtilis HJ5]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTTAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCACATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTAATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAGAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.95	100	0.99
rapC	Bacillus subtilis subsp. subtilis str. 168	57.632	99.738	0.575