Detailed information NTG0117076

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AW03_RS17580
• Genome accession: NZ_CP007173
• Coordinates: 3416620..3417777 (-)
• Length: 385 a.a.
• NCBI ID: WP_003227983.1
• Uniprot ID: A0A199WDV9
• Organism: Bacillus subtilis HJ5
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3411620..3422777

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AW03_RS17550 (AW03_033790)	yvyF	3411873..3412292 (-)	420	WP_003227995.1	TIGR03826 family flagellar region protein	-
AW03_RS17555 (AW03_033800)	comFC	3412366..3413088 (-)	723	WP_015384784.1	comF operon protein ComFC	Machinery gene
AW03_RS17560 (AW03_033810)	comFB	3413052..3413348 (-)	297	WP_015483764.1	late competence protein ComFB	-
AW03_RS17565 (AW03_033820)	comFA	3413408..3414799 (-)	1392	WP_015384785.1	ATP-dependent helicase ComFA	Machinery gene
AW03_RS17570 (AW03_033830)	fakBA	3414905..3415750 (-)	846	WP_003227986.1	DegV family protein	-
AW03_RS17575 (AW03_033840)	degU	3415848..3416537 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
AW03_RS17580 (AW03_033850)	degS	3416620..3417777 (-)	1158	WP_003227983.1	two-component sensor histidine kinase DegS	Regulator
AW03_RS17585 (AW03_033860)	yvyE	3417994..3418647 (+)	654	WP_003227979.1	YigZ family protein	-
AW03_RS17590 (AW03_033870)	tagV	3418647..3419822 (+)	1176	WP_015251114.1	polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV	-
AW03_RS17595 (AW03_033880)	tagO	3419895..3420971 (-)	1077	WP_003227975.1	MraY family glycosyltransferase	-
AW03_RS17600 (AW03_033890)	tuaH	3421116..3422309 (-)	1194	WP_080030751.1	glycosyltransferase family 1 protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44957.76 Da
• Isoelectric Point: 6.2957

>NTDB_id=117076 AW03_RS17580 WP_003227983.1 3416620..3417777(-) (degS) [Bacillus subtilis HJ5]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=117076 AW03_RS17580 WP_003227983.1 3416620..3417777(-) (degS) [Bacillus subtilis HJ5]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATTGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATCGAGCTTGGCGATAAACTTGAAGTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAGATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

3D structure

• AlphaFold DB: A0A199WDV9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	100	100	1