Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | AW03_RS12625 | Genome accession | NZ_CP007173 |
| Coordinates | 2454733..2455143 (-) | Length | 136 a.a. |
| NCBI ID | WP_009967785.1 | Uniprot ID | A0A6I4D881 |
| Organism | Bacillus subtilis HJ5 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 2449733..2460143
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AW03_RS12590 | - | 2449820..2449960 (+) | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
| AW03_RS12600 (AW03_024300) | yqeF | 2450266..2450997 (-) | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| AW03_RS12605 (AW03_024310) | cwlH | 2451249..2452001 (-) | 753 | WP_015483449.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| AW03_RS12610 (AW03_024320) | yqeD | 2452188..2452814 (+) | 627 | WP_015384137.1 | TVP38/TMEM64 family protein | - |
| AW03_RS12615 (AW03_024330) | gnd | 2452833..2453726 (-) | 894 | WP_015384138.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| AW03_RS12620 (AW03_024340) | yqeB | 2453978..2454700 (+) | 723 | WP_015384139.1 | hypothetical protein | - |
| AW03_RS12625 (AW03_024350) | nucA/comI | 2454733..2455143 (-) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| AW03_RS12630 (AW03_024360) | sigK | 2455339..2456067 (+) | 729 | WP_013308023.1 | RNA polymerase sporulation sigma factor SigK | - |
| AW03_RS21240 | - | 2456149..2456340 (-) | 192 | Protein_2460 | recombinase family protein | - |
| AW03_RS21245 | - | 2456298..2456462 (-) | 165 | WP_015483452.1 | hypothetical protein | - |
| AW03_RS12640 (AW03_024380) | psiE | 2457003..2457419 (-) | 417 | WP_003246154.1 | phosphate-starvation-inducible protein PsiE | - |
| AW03_RS12645 (AW03_024390) | yrkQ | 2457465..2458763 (-) | 1299 | WP_015483453.1 | two-component system sensor histidine kinase YrkQ | - |
| AW03_RS12650 (AW03_024400) | yrkP | 2458750..2459445 (-) | 696 | WP_015384143.1 | two-component response regulator YrkP | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 14967.97 Da Isoelectric Point: 5.1853
>NTDB_id=117059 AW03_RS12625 WP_009967785.1 2454733..2455143(-) (nucA/comI) [Bacillus subtilis HJ5]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
Nucleotide
Download Length: 411 bp
>NTDB_id=117059 AW03_RS12625 WP_009967785.1 2454733..2455143(-) (nucA/comI) [Bacillus subtilis HJ5]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGTGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGTGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
62.609 |
84.559 |
0.529 |