Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   ACLV7W_RS01940 Genome accession   NZ_OZ217346
Coordinates   399503..399796 (+) Length   97 a.a.
NCBI ID   WP_000797746.1    Uniprot ID   A0A2N6PR83
Organism   Streptococcus mitis isolate S. mitis D22     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 394503..404796
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7W_RS01915 (SMID22_03900) - 396690..397028 (+) 339 WP_153208873.1 type II toxin-antitoxin system RelE/ParE family toxin -
  ACLV7W_RS01920 (SMID22_03910) - 397021..398106 (+) 1086 WP_153208875.1 HigA family addiction module antitoxin -
  ACLV7W_RS01925 (SMID22_03920) - 398237..398641 (+) 405 WP_153208877.1 YbgA family protein -
  ACLV7W_RS01930 (SMID22_03930) - 398625..398990 (+) 366 WP_153208879.1 TIGR02328 family protein -
  ACLV7W_RS01935 (SMID22_03940) - 399148..399513 (+) 366 WP_227326104.1 type II toxin-antitoxin system RelE/ParE family toxin -
  ACLV7W_RS01940 (SMID22_03950) HI0659 399503..399796 (+) 294 WP_000797746.1 helix-turn-helix domain-containing protein Machinery gene
  ACLV7W_RS01945 (SMID22_03960) metE 400149..402398 (+) 2250 WP_153208898.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  ACLV7W_RS01950 (SMID22_03970) metF 402460..403326 (+) 867 WP_153208900.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10765.46 Da        Isoelectric Point: 7.0172

>NTDB_id=1170429 ACLV7W_RS01940 WP_000797746.1 399503..399796(+) (HI0659) [Streptococcus mitis isolate S. mitis D22]
MKNSAIGSNWKDVRSELFTKEEILESDMRVAIMSELIEARHEQGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVL
ASLGKTLAVVPLEQRKS

Nucleotide


Download         Length: 294 bp        

>NTDB_id=1170429 ACLV7W_RS01940 WP_000797746.1 399503..399796(+) (HI0659) [Streptococcus mitis isolate S. mitis D22]
ATGAAGAATAGTGCCATTGGGAGTAATTGGAAGGATGTCCGGTCTGAACTATTTACTAAGGAGGAAATCCTTGAAAGTGA
TATGCGAGTGGCTATTATGAGTGAGCTGATTGAGGCTAGGCATGAACAAGGAATCAGCCAGAAAAAGCTAGAAGAACTTA
GTGGAGTGAGCCAGCCGGTTATTGCTAGGATGGAAACAGGCAAGACTAGCCCCCAGTTGGACACAGTCTTGAAAGTTTTA
GCCAGTTTAGGAAAGACATTAGCAGTCGTCCCCCTCGAACAGAGAAAGAGTTGA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(37-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2N6PR83

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

59.341

93.814

0.557

Multiple sequence alignment