Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ACLV7D_RS01720 Genome accession   NZ_OZ217345
Coordinates   340597..342366 (+) Length   589 a.a.
NCBI ID   WP_218764807.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis F22     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 335597..347366
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7D_RS01690 (SMIF22_03260) - 335679..336137 (+) 459 WP_031233612.1 DUF4231 domain-containing protein -
  ACLV7D_RS01695 (SMIF22_03270) - 336150..336758 (+) 609 WP_173220132.1 hypothetical protein -
  ACLV7D_RS01700 (SMIF22_03280) - 336751..337161 (+) 411 WP_023936458.1 hypothetical protein -
  ACLV7D_RS01705 (SMIF22_03290) ply 337172..338587 (+) 1416 WP_218764808.1 cholesterol-dependent cytolysin pneumolysin -
  ACLV7D_RS01710 (SMIF22_03300) - 339259..339975 (+) 717 WP_049524687.1 YebC/PmpR family DNA-binding transcriptional regulator -
  ACLV7D_RS01715 (SMIF22_03310) - 340152..340622 (+) 471 WP_173226176.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACLV7D_RS01720 (SMIF22_03320) rcrP 340597..342366 (+) 1770 WP_218764807.1 ABC transporter ATP-binding protein Regulator
  ACLV7D_RS01725 (SMIF22_03330) rcrQ 342356..344116 (+) 1761 WP_218764806.1 ABC transporter ATP-binding protein Regulator
  ACLV7D_RS01730 (SMIF22_03340) - 344212..344715 (+) 504 WP_218764805.1 phosphatase PAP2 family protein -
  ACLV7D_RS01735 (SMIF22_03350) - 344935..345381 (+) 447 WP_218764804.1 LytTR family DNA-binding domain-containing protein -
  ACLV7D_RS01740 (SMIF22_03360) - 345386..346060 (+) 675 WP_050243275.1 hypothetical protein -
  ACLV7D_RS01745 (SMIF22_03370) - 346304..346501 (+) 198 Protein_310 N-acetylmuramoyl-L-alanine amidase family protein -
  ACLV7D_RS01750 - 346526..346657 (-) 132 WP_268810481.1 hypothetical protein -
  ACLV7D_RS01755 (SMIF22_03380) - 346751..347050 (+) 300 WP_218764802.1 DUF4651 domain-containing protein -
  ACLV7D_RS01760 (SMIF22_03390) - 347047..347364 (+) 318 WP_000615777.1 thioredoxin family protein -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65351.78 Da        Isoelectric Point: 6.3830

>NTDB_id=1170348 ACLV7D_RS01720 WP_218764807.1 340597..342366(+) (rcrP) [Streptococcus mitis isolate S. mitis F22]
MKKLAKRISRKEWGMILLAILCTCFSVYLELEVPTYISKITDLLGSQGTNLDELWQPASMMVGMSFLAFLSVVAVGFFAS
RVAASYTSRLRSDIFNRVLDYSQTEIKKFSIPSLLTRTTNDITQVQMLITMGLQVVTRGPIMAIWAIGKILGHSEYWLWA
VLVAVIVNVLMTTVLMTLAFPKQSLIQGLTDKLNSITRESLTGIRVVRAYNAEEYQNEKFAAANDELTRFNLFVNRLMAI
LNPIMMGISSGLSVAIYWIGAYVINDAAPTARLPLFSDMVVFMSYAMQVVMGFLLMGALFIVLPRTMVSAKRINQVLDLH
SSIQNPAQVQLADENLKGQVEFKDVSFRYAANSEAVIEHVSFRADAGQTVAFIGSTGSGKSTLVNLIPRFYDVSAGEILV
DGVNVQDYSLEDLRNKVGYIPQKAVLFSGDVKGNLDFGQSQETPLSEQAMWQALELAQSKNFIEDKEAGLASEVAQGGTN
FSGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRVLRQELVEKTKSMTKLIVAQRISTIMDADLILVLDQGKVVGQG
THKELLANNEVYQEIAYSQLSKEELEHGK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=1170348 ACLV7D_RS01720 WP_218764807.1 340597..342366(+) (rcrP) [Streptococcus mitis isolate S. mitis F22]
ATGAAGAAATTAGCCAAACGAATTAGTAGAAAAGAATGGGGGATGATTTTACTAGCCATTCTATGTACTTGCTTTTCGGT
CTATCTAGAGTTGGAAGTGCCGACCTATATCTCGAAAATTACGGATTTGCTAGGTAGTCAAGGAACTAATTTAGATGAGT
TGTGGCAGCCGGCAAGCATGATGGTGGGAATGTCCTTTCTTGCCTTCTTGTCCGTAGTTGCAGTTGGATTTTTTGCATCC
CGAGTGGCGGCTTCTTATACTAGTAGGCTGAGAAGTGATATTTTTAACCGAGTTTTGGATTACTCGCAGACAGAGATTAA
GAAATTCTCTATTCCTAGTCTCTTGACGCGTACCACCAATGACATTACTCAAGTTCAGATGTTGATTACCATGGGCTTGC
AAGTGGTGACGCGTGGTCCAATTATGGCTATCTGGGCTATTGGGAAGATTTTAGGTCATTCAGAATACTGGCTCTGGGCG
GTACTTGTGGCAGTGATTGTCAACGTCCTGATGACGACTGTTTTGATGACGCTAGCCTTTCCAAAACAGTCCTTGATTCA
GGGGCTGACAGATAAACTGAACAGTATCACTCGTGAGAGTTTAACAGGTATTCGCGTCGTTCGCGCCTACAATGCTGAAG
AATACCAAAATGAAAAATTTGCAGCAGCAAATGATGAATTGACACGCTTTAATTTGTTTGTCAACCGTCTTATGGCTATT
TTGAACCCTATCATGATGGGGATTTCAAGTGGTTTGAGTGTGGCGATTTACTGGATTGGGGCCTATGTGATTAACGACGC
TGCTCCGACAGCGCGTCTGCCCCTCTTTAGTGATATGGTTGTTTTCATGTCTTATGCCATGCAGGTTGTTATGGGATTCC
TTCTCATGGGAGCGCTCTTCATCGTTCTTCCCCGAACTATGGTCTCTGCTAAGCGGATTAATCAGGTTCTAGATTTGCAT
TCTTCTATCCAAAATCCTGCTCAAGTGCAGCTGGCTGATGAAAACCTCAAAGGTCAGGTCGAATTTAAGGATGTGTCCTT
CCGCTATGCGGCAAATTCGGAGGCGGTTATTGAACATGTTAGCTTTAGAGCAGATGCTGGTCAAACAGTGGCCTTTATTG
GGTCAACAGGTTCTGGTAAATCAACTCTGGTCAATCTTATTCCACGTTTCTACGATGTGTCAGCAGGAGAAATTCTGGTG
GACGGTGTCAATGTTCAAGATTACAGTTTGGAAGATTTGCGCAACAAGGTTGGTTATATTCCCCAGAAAGCGGTTCTCTT
TTCAGGTGATGTTAAGGGCAATTTGGACTTTGGACAGAGTCAAGAAACACCACTTAGTGAGCAAGCTATGTGGCAAGCCT
TGGAATTGGCCCAGTCTAAGAACTTTATCGAAGACAAGGAAGCGGGCTTAGCGTCAGAAGTGGCCCAAGGAGGAACCAAC
TTCTCAGGTGGTCAAAGACAGCGTCTGGCCATTGCGCGTGCCTTGGCTCGGAAACCAGAAATCCTCATCTTTGATGACTC
CTTCTCAGCCTTGGACTACAAGACAGATCGAGTCCTACGCCAAGAGCTAGTAGAGAAAACCAAGTCTATGACCAAGCTTA
TCGTTGCACAGCGTATTTCAACGATTATGGATGCAGATTTGATTTTGGTCTTGGATCAAGGAAAAGTCGTGGGACAAGGC
ACCCACAAAGAACTTCTAGCAAACAACGAAGTTTACCAAGAAATTGCCTATTCACAACTATCGAAGGAGGAATTGGAACA
TGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(358-507)

ABC transporter transmembrane region (ABC_membrane)

(17-292)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

66.389

100

0.677

Multiple sequence alignment