Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   AW03_RS06070 Genome accession   NZ_CP007173
Coordinates   1181359..1182480 (+) Length   373 a.a.
NCBI ID   WP_236822450.1    Uniprot ID   -
Organism   Bacillus subtilis HJ5     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1176359..1187480
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AW03_RS06045 (AW03_011460) yjbB 1177005..1178222 (+) 1218 WP_080030656.1 MFS transporter -
  AW03_RS06050 (AW03_011470) yjbC 1178386..1178961 (+) 576 WP_015383352.1 GNAT family N-acetyltransferase -
  AW03_RS06055 (AW03_011480) spx 1179142..1179537 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  AW03_RS06060 (AW03_011490) yjbE 1179580..1180236 (-) 657 WP_015483086.1 TerC family protein -
  AW03_RS21600 - 1180406..1180546 (+) 141 WP_119122854.1 hypothetical protein -
  AW03_RS06065 (AW03_011500) mecA 1180513..1181169 (+) 657 WP_015383354.1 adaptor protein MecA Regulator
  AW03_RS21605 - 1181172..1181285 (-) 114 Protein_1159 hypothetical protein -
  AW03_RS06070 (AW03_011510) coiA 1181359..1182480 (+) 1122 WP_236822450.1 competence protein CoiA Machinery gene
  AW03_RS06075 (AW03_011520) pepF 1182710..1184539 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  AW03_RS20950 (AW03_011530) - 1184577..1184744 (-) 168 WP_003244944.1 hypothetical protein -
  AW03_RS06090 (AW03_011540) spxH 1185059..1185958 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  AW03_RS06095 (AW03_011550) bhbI 1185955..1186353 (-) 399 WP_015383357.1 thiol management oxidoreductase component -
  AW03_RS06100 (AW03_011560) cwlQ 1186608..1187333 (-) 726 WP_015383358.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43750.82 Da        Isoelectric Point: 10.0038

>NTDB_id=117033 AW03_RS06070 WP_236822450.1 1181359..1182480(+) (coiA) [Bacillus subtilis HJ5]
MFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPNVFQKLTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGVDDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKEINRL
RLLFYEKRQTPFSFLPTEVFVPVSKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNKNIALRFECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPASGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=117033 AW03_RS06070 WP_236822450.1 1181359..1182480(+) (coiA) [Bacillus subtilis HJ5]
ATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAGTCCTGCTCCATAGATATCGAACCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGTTGTATGTATGGCTGAAAACGCAACGGGCTTCACCAATATTGGAGCCG
TATATAAGGACCATCAACCAAAGACCGGACGTCATGGCAAGGATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCACCAAATGTCTTTCAGAAGCTGACAGAGGGCTTCAAACAAGAAGGAATCATCCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTTAGCCACATCATACCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGTAGACGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCACATCGGTTTAACTCAAAGGAAATAAATCGCCTT
AGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGTAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGGTAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAGAACATTGCACTCAGGTTTGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAAGTGGCATACACTCAATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

97.319

100

0.973


Multiple sequence alignment