Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   AW03_RS04445 Genome accession   NZ_CP007173
Coordinates   878645..879436 (+) Length   263 a.a.
NCBI ID   WP_015383146.1    Uniprot ID   -
Organism   Bacillus subtilis HJ5     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 873645..884436
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AW03_RS04415 (AW03_008420) sxzA 874484..875515 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  AW03_RS04420 (AW03_008430) yfhB 875630..876511 (+) 882 WP_015383143.1 PhzF family phenazine biosynthesis isomerase -
  AW03_RS04425 (AW03_008440) yfhC 876599..877183 (+) 585 WP_015482973.1 nitroreductase -
  AW03_RS04430 (AW03_008450) yfhD 877222..877413 (-) 192 WP_003233561.1 YfhD family protein -
  AW03_RS20875 (AW03_008460) yfhE 877480..877590 (-) 111 WP_003223230.1 YfhE family protein -
  AW03_RS04440 (AW03_008470) yfhF 877645..878556 (-) 912 WP_038428645.1 TIGR01777 family oxidoreductase -
  AW03_RS04445 (AW03_008480) recX 878645..879436 (+) 792 WP_015383146.1 recombination regulator RecX Regulator
  AW03_RS04450 (AW03_008490) yfhH 879445..879759 (+) 315 WP_015383147.1 YfhH family protein -
  AW03_RS04460 (AW03_008510) yfhI 879902..881095 (+) 1194 WP_015482975.1 MFS transporter -
  AW03_RS04465 (AW03_008520) sspK 881127..881279 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  AW03_RS04470 (AW03_008530) yfhJ 881404..881673 (+) 270 WP_003243789.1 YfhJ family protein -
  AW03_RS04475 (AW03_008540) yfhK 881818..882336 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  AW03_RS04480 (AW03_008550) spdL 882421..882753 (+) 333 WP_041517766.1 SdpC immunity protein SpdL -
  AW03_RS04485 (AW03_008560) ephM 882740..883600 (+) 861 WP_015383151.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30898.10 Da        Isoelectric Point: 6.6690

>NTDB_id=117020 AW03_RS04445 WP_015383146.1 878645..879436(+) (recX) [Bacillus subtilis HJ5]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EEHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=117020 AW03_RS04445 WP_015383146.1 878645..879436(+) (recX) [Bacillus subtilis HJ5]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGAGCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGGGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACGAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTACGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTTCTGCAGGAAGAGGAGTAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.24

100

0.992

Multiple sequence alignment