Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | ACLV65_RS10000 | Genome accession | NZ_OZ217342 |
| Coordinates | 2039942..2042374 (-) | Length | 810 a.a. |
| NCBI ID | WP_411865168.1 | Uniprot ID | - |
| Organism | Streptococcus mitis isolate S. mitis B22 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2034942..2047374
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLV65_RS09985 (SMIB22_19700) | - | 2036730..2037257 (-) | 528 | WP_050260210.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| ACLV65_RS09990 (SMIB22_19710) | - | 2037426..2038769 (-) | 1344 | WP_411865167.1 | ATP-binding protein | - |
| ACLV65_RS09995 (SMIB22_19720) | rr06 | 2038766..2039419 (-) | 654 | WP_049513297.1 | two-component system response regulator RR06 | - |
| ACLV65_RS10000 (SMIB22_19730) | clpC | 2039942..2042374 (-) | 2433 | WP_411865168.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| ACLV65_RS10005 (SMIB22_19740) | - | 2042376..2042834 (-) | 459 | WP_001211277.1 | CtsR family transcriptional regulator | - |
| ACLV65_RS10010 (SMIB22_19750) | - | 2042957..2043682 (-) | 726 | WP_261061378.1 | ABC transporter ATP-binding protein | - |
| ACLV65_RS10015 (SMIB22_19760) | - | 2043682..2044689 (-) | 1008 | WP_061864811.1 | ABC transporter substrate-binding protein | - |
| ACLV65_RS10020 (SMIB22_19770) | - | 2044728..2045486 (-) | 759 | WP_411865169.1 | ABC transporter permease | - |
| ACLV65_RS10025 (SMIB22_19780) | - | 2045449..2045739 (-) | 291 | WP_004235758.1 | thiamine-binding protein | - |
| ACLV65_RS10030 (SMIB22_19790) | cbpD | 2045994..2047355 (-) | 1362 | WP_411865170.1 | choline binding-anchored murein hydrolase CbpD | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90161.95 Da Isoelectric Point: 6.0169
>NTDB_id=1170152 ACLV65_RS10000 WP_411865168.1 2039942..2042374(-) (clpC) [Streptococcus mitis isolate S. mitis B22]
MNYSKALNECIESAYMVAGHFGARYLESWHLLIAMSNHSYSVAGATLNDYPYEMDRLEEVALELTETDYSQDETFTELPF
SHRLQVLFDEAEYVASVVHAKVLGTEHVLYAILHDGNALATRILERAGFSYEDKKDQVKIAALRRNLEERAGWTREDLKA
LRQRHRTVADKQNSMANMMGMPQTPSGGLEDYTHDLTEQARSGKLEPVIGRDKEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPTEMAKMRVLELDLMNVVAGTRFRGDFEERMNNIIKDIEEDGQVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVTIEEPSVADSMTILQGLKATYEKHHRVQITDEAVET
AVKMAHRYLTSRHLPDSAIDLLDEAAATVQNKAKHVKADDSGLSPADKALMDGKWKQAAQLIAKEEEVPVYKDLVTEADI
LTTLSRLSGIPVQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAK
ALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDD
GVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQKNMEKRMFEELKKAYRPEFINRIDEKVVFHSLSS
DHMQEVVKIMVKPLVASLAEKGIDLKLQASALKLLANQGYDPEMGARPLRRTLQTEVEDKLAELLLKGELEAGSTLKIGV
KAGQLKFDIV
MNYSKALNECIESAYMVAGHFGARYLESWHLLIAMSNHSYSVAGATLNDYPYEMDRLEEVALELTETDYSQDETFTELPF
SHRLQVLFDEAEYVASVVHAKVLGTEHVLYAILHDGNALATRILERAGFSYEDKKDQVKIAALRRNLEERAGWTREDLKA
LRQRHRTVADKQNSMANMMGMPQTPSGGLEDYTHDLTEQARSGKLEPVIGRDKEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPTEMAKMRVLELDLMNVVAGTRFRGDFEERMNNIIKDIEEDGQVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVTIEEPSVADSMTILQGLKATYEKHHRVQITDEAVET
AVKMAHRYLTSRHLPDSAIDLLDEAAATVQNKAKHVKADDSGLSPADKALMDGKWKQAAQLIAKEEEVPVYKDLVTEADI
LTTLSRLSGIPVQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAK
ALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDD
GVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQKNMEKRMFEELKKAYRPEFINRIDEKVVFHSLSS
DHMQEVVKIMVKPLVASLAEKGIDLKLQASALKLLANQGYDPEMGARPLRRTLQTEVEDKLAELLLKGELEAGSTLKIGV
KAGQLKFDIV
Nucleotide
Download Length: 2433 bp
>NTDB_id=1170152 ACLV65_RS10000 WP_411865168.1 2039942..2042374(-) (clpC) [Streptococcus mitis isolate S. mitis B22]
ATGAACTATTCAAAAGCATTGAATGAATGTATCGAAAGTGCCTACATGGTTGCTGGCCATTTTGGAGCTCGTTACCTAGA
GTCTTGGCACTTGTTGATTGCCATGTCCAATCACAGTTATAGTGTGGCAGGGGCGACTTTAAATGATTATCCGTATGAGA
TGGATCGTTTGGAAGAGGTGGCTTTGGAACTGACTGAAACGGACTATAGCCAGGATGAAACCTTTACGGAATTGCCGTTC
TCCCATCGTTTGCAGGTTCTTTTTGATGAAGCAGAGTATGTAGCGTCAGTGGTCCATGCTAAGGTGCTAGGGACAGAGCA
TGTCCTCTATGCGATTTTGCATGATGGCAATGCCTTGGCGACTCGTATTTTGGAGAGGGCTGGTTTTTCTTATGAAGACA
AGAAAGATCAGGTCAAGATTGCTGCCCTTCGTCGAAATTTAGAAGAACGGGCAGGATGGACTCGTGAAGACCTCAAGGCT
TTACGCCAACGTCATCGTACAGTAGCTGACAAGCAAAATTCCATGGCCAATATGATGGGCATGCCGCAGACTCCTAGTGG
TGGCCTCGAGGACTATACGCATGATTTGACAGAGCAAGCGCGTTCTGGCAAGTTAGAACCAGTCATCGGTCGGGATAAGG
AAATCTCGCGTATGATTCAAATCTTGAGCCGTAAGACCAAGAACAATCCTGTCTTGGTTGGGGATGCTGGTGTCGGGAAA
ACAGCTCTGGCCCTTGGTCTTGCCCAGCGTATTGCTAGTGGGGATGTTCCTACGGAAATGGCTAAGATGCGCGTGTTAGA
GCTTGATTTGATGAATGTCGTGGCAGGGACACGCTTCCGTGGTGACTTTGAAGAACGCATGAACAATATCATTAAGGATA
TTGAAGAAGATGGCCAAGTCATCCTCTTTATCGATGAACTTCACACTATCATGGGTTCTGGGAGTGGAATTGACTCAACT
CTGGATGCGGCCAATATCTTGAAACCAGCCTTGGCGCGTGGAACTTTGAGAACGGTTGGTGCGACTACTCAGGAAGAATA
TCAAAAACATATCGAAAAAGATGCGGCCCTTTCTCGTCGTTTCGCCAAAGTAACGATTGAAGAACCAAGTGTGGCAGACA
GCATGACCATTTTACAGGGCTTGAAGGCGACTTATGAGAAACATCACCGTGTGCAAATCACAGATGAAGCGGTTGAAACA
GCTGTCAAGATGGCGCATCGTTACTTGACTAGCCGTCACTTGCCAGACTCTGCTATCGACCTCTTGGATGAGGCGGCAGC
AACAGTGCAAAATAAGGCTAAGCATGTAAAAGCAGACGATTCAGGTTTGAGTCCAGCTGACAAGGCCTTGATGGATGGTA
AGTGGAAACAGGCAGCTCAGCTAATCGCAAAAGAAGAGGAAGTCCCAGTCTATAAAGATTTGGTGACAGAGGCTGATATT
TTGACTACCTTGAGTCGCTTGTCAGGTATCCCAGTCCAAAAACTGACTCAAACGGATGCTAAGAAGTACCTGAATCTTGA
AGCTGAACTGCACAAACGTGTCATCGGTCAAGATCAAGCAGTTTCAAGTATTAGCCGTGCCATTCGTCGCAACCAGTCAG
GTATTCGCAGTCACAAGCGTCCGATTGGTTCCTTTATGTTCCTAGGACCCACAGGTGTCGGTAAGACCGAATTGGCCAAG
GCTTTGGCAGAAGTTCTCTTTGATGACGAATCAGCTCTTATTCGCTTTGATATGAGTGAGTATATGGAGAAATTTGCAGC
CAGCCGTCTCAATGGAGCTCCTCCGGGCTATGTGGGTTATGAAGAAGGTGGGGAGTTGACCGAGAAGGTTCGTAACAAAC
CCTATTCCGTTCTCCTCTTTGACGAAGTAGAGAAGGCCCACCCAGACATCTTTAATGTTCTCTTGCAGGTCTTGGATGAC
GGTGTCTTGACTGATAGTAAGGGACGCAAGGTTGACTTTTCAAATACCATTATCATCATGACGTCAAACCTTGGTGCGAC
AGCCCTTCGTGATGATAAAACCGTTGGCTTTGGAGCTAAGGACATTCGTTTTGACCAGAAAAATATGGAAAAACGCATGT
TTGAAGAGCTGAAAAAAGCTTATAGACCTGAGTTTATCAACCGTATTGATGAAAAGGTAGTCTTCCATAGTCTATCTAGT
GACCATATGCAGGAAGTGGTGAAGATTATGGTCAAACCTTTAGTGGCAAGTTTGGCTGAAAAAGGCATTGACTTGAAATT
ACAAGCTTCAGCACTGAAATTGTTGGCAAATCAAGGATATGACCCAGAGATGGGAGCTCGCCCACTTCGCAGAACCCTGC
AAACAGAAGTGGAAGACAAGTTGGCAGAACTTCTTCTCAAGGGAGAATTAGAGGCAGGCAGCACACTTAAGATTGGTGTT
AAAGCAGGCCAGTTAAAATTTGATATTGTATAA
ATGAACTATTCAAAAGCATTGAATGAATGTATCGAAAGTGCCTACATGGTTGCTGGCCATTTTGGAGCTCGTTACCTAGA
GTCTTGGCACTTGTTGATTGCCATGTCCAATCACAGTTATAGTGTGGCAGGGGCGACTTTAAATGATTATCCGTATGAGA
TGGATCGTTTGGAAGAGGTGGCTTTGGAACTGACTGAAACGGACTATAGCCAGGATGAAACCTTTACGGAATTGCCGTTC
TCCCATCGTTTGCAGGTTCTTTTTGATGAAGCAGAGTATGTAGCGTCAGTGGTCCATGCTAAGGTGCTAGGGACAGAGCA
TGTCCTCTATGCGATTTTGCATGATGGCAATGCCTTGGCGACTCGTATTTTGGAGAGGGCTGGTTTTTCTTATGAAGACA
AGAAAGATCAGGTCAAGATTGCTGCCCTTCGTCGAAATTTAGAAGAACGGGCAGGATGGACTCGTGAAGACCTCAAGGCT
TTACGCCAACGTCATCGTACAGTAGCTGACAAGCAAAATTCCATGGCCAATATGATGGGCATGCCGCAGACTCCTAGTGG
TGGCCTCGAGGACTATACGCATGATTTGACAGAGCAAGCGCGTTCTGGCAAGTTAGAACCAGTCATCGGTCGGGATAAGG
AAATCTCGCGTATGATTCAAATCTTGAGCCGTAAGACCAAGAACAATCCTGTCTTGGTTGGGGATGCTGGTGTCGGGAAA
ACAGCTCTGGCCCTTGGTCTTGCCCAGCGTATTGCTAGTGGGGATGTTCCTACGGAAATGGCTAAGATGCGCGTGTTAGA
GCTTGATTTGATGAATGTCGTGGCAGGGACACGCTTCCGTGGTGACTTTGAAGAACGCATGAACAATATCATTAAGGATA
TTGAAGAAGATGGCCAAGTCATCCTCTTTATCGATGAACTTCACACTATCATGGGTTCTGGGAGTGGAATTGACTCAACT
CTGGATGCGGCCAATATCTTGAAACCAGCCTTGGCGCGTGGAACTTTGAGAACGGTTGGTGCGACTACTCAGGAAGAATA
TCAAAAACATATCGAAAAAGATGCGGCCCTTTCTCGTCGTTTCGCCAAAGTAACGATTGAAGAACCAAGTGTGGCAGACA
GCATGACCATTTTACAGGGCTTGAAGGCGACTTATGAGAAACATCACCGTGTGCAAATCACAGATGAAGCGGTTGAAACA
GCTGTCAAGATGGCGCATCGTTACTTGACTAGCCGTCACTTGCCAGACTCTGCTATCGACCTCTTGGATGAGGCGGCAGC
AACAGTGCAAAATAAGGCTAAGCATGTAAAAGCAGACGATTCAGGTTTGAGTCCAGCTGACAAGGCCTTGATGGATGGTA
AGTGGAAACAGGCAGCTCAGCTAATCGCAAAAGAAGAGGAAGTCCCAGTCTATAAAGATTTGGTGACAGAGGCTGATATT
TTGACTACCTTGAGTCGCTTGTCAGGTATCCCAGTCCAAAAACTGACTCAAACGGATGCTAAGAAGTACCTGAATCTTGA
AGCTGAACTGCACAAACGTGTCATCGGTCAAGATCAAGCAGTTTCAAGTATTAGCCGTGCCATTCGTCGCAACCAGTCAG
GTATTCGCAGTCACAAGCGTCCGATTGGTTCCTTTATGTTCCTAGGACCCACAGGTGTCGGTAAGACCGAATTGGCCAAG
GCTTTGGCAGAAGTTCTCTTTGATGACGAATCAGCTCTTATTCGCTTTGATATGAGTGAGTATATGGAGAAATTTGCAGC
CAGCCGTCTCAATGGAGCTCCTCCGGGCTATGTGGGTTATGAAGAAGGTGGGGAGTTGACCGAGAAGGTTCGTAACAAAC
CCTATTCCGTTCTCCTCTTTGACGAAGTAGAGAAGGCCCACCCAGACATCTTTAATGTTCTCTTGCAGGTCTTGGATGAC
GGTGTCTTGACTGATAGTAAGGGACGCAAGGTTGACTTTTCAAATACCATTATCATCATGACGTCAAACCTTGGTGCGAC
AGCCCTTCGTGATGATAAAACCGTTGGCTTTGGAGCTAAGGACATTCGTTTTGACCAGAAAAATATGGAAAAACGCATGT
TTGAAGAGCTGAAAAAAGCTTATAGACCTGAGTTTATCAACCGTATTGATGAAAAGGTAGTCTTCCATAGTCTATCTAGT
GACCATATGCAGGAAGTGGTGAAGATTATGGTCAAACCTTTAGTGGCAAGTTTGGCTGAAAAAGGCATTGACTTGAAATT
ACAAGCTTCAGCACTGAAATTGTTGGCAAATCAAGGATATGACCCAGAGATGGGAGCTCGCCCACTTCGCAGAACCCTGC
AAACAGAAGTGGAAGACAAGTTGGCAGAACTTCTTCTCAAGGGAGAATTAGAGGCAGGCAGCACACTTAAGATTGGTGTT
AAAGCAGGCCAGTTAAAATTTGATATTGTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae D39 |
98.888 |
99.877 |
0.988 |
| clpC | Streptococcus pneumoniae TIGR4 |
98.888 |
99.877 |
0.988 |
| clpC | Streptococcus pneumoniae Rx1 |
98.888 |
99.877 |
0.988 |
| clpC | Streptococcus mutans UA159 |
67.199 |
100 |
0.675 |
| clpC | Streptococcus thermophilus LMD-9 |
66.258 |
100 |
0.667 |
| clpC | Streptococcus thermophilus LMG 18311 |
66.135 |
100 |
0.665 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.854 |
100 |
0.5 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.365 |
99.877 |
0.453 |
| clpE | Streptococcus mutans UA159 |
48.83 |
79.136 |
0.386 |
| clpE | Streptococcus pneumoniae Rx1 |
46.994 |
78.025 |
0.367 |
| clpE | Streptococcus pneumoniae D39 |
46.994 |
78.025 |
0.367 |
| clpE | Streptococcus pneumoniae R6 |
46.994 |
78.025 |
0.367 |
| clpE | Streptococcus pneumoniae TIGR4 |
46.994 |
78.025 |
0.367 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
46.945 |
76.79 |
0.36 |