Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   ACLV65_RS07825 Genome accession   NZ_OZ217342
Coordinates   1577507..1577800 (-) Length   97 a.a.
NCBI ID   WP_185776784.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis B22     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1572507..1582800
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV65_RS07815 (SMIB22_15360) metF 1573935..1574801 (-) 867 WP_050265982.1 methylenetetrahydrofolate reductase [NAD(P)H] -
  ACLV65_RS07820 (SMIB22_15370) metE 1574905..1577154 (-) 2250 WP_411864978.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  ACLV65_RS07825 (SMIB22_15380) HI0659 1577507..1577800 (-) 294 WP_185776784.1 helix-turn-helix domain-containing protein Machinery gene
  ACLV65_RS07830 - 1577859..1578399 (-) 541 Protein_1496 transposase -
  ACLV65_RS07835 (SMIB22_15390) - 1578555..1579556 (+) 1002 WP_411864979.1 endonuclease/exonuclease/phosphatase family protein -
  ACLV65_RS07840 (SMIB22_15400) pheT 1579778..1582183 (-) 2406 WP_411864980.1 phenylalanine--tRNA ligase subunit beta -
  ACLV65_RS07845 (SMIB22_15410) - 1582260..1582769 (-) 510 WP_411864981.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10707.42 Da        Isoelectric Point: 7.0170

>NTDB_id=1170137 ACLV65_RS07825 WP_185776784.1 1577507..1577800(-) (HI0659) [Streptococcus mitis isolate S. mitis B22]
MKNSAIGSNWKDVRSELFTKEEILESDMRVAIMSELIEARHEQGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVL
ASLGKTLAVVPLEQKKG

Nucleotide


Download         Length: 294 bp        

>NTDB_id=1170137 ACLV65_RS07825 WP_185776784.1 1577507..1577800(-) (HI0659) [Streptococcus mitis isolate S. mitis B22]
ATGAAGAATAGTGCTATCGGGAGTAACTGGAAGGATGTCCGATCTGAACTCTTTACCAAGGAGGAAATCCTTGAAAGTGA
TATGCGAGTGGCTATCATGAGTGAGTTGATTGAAGCCAGACATGAGCAAGGAATCAGCCAGAAAAAGCTAGAAGAACTTA
GTGGAGTAAGCCAGCCTGTCATAGCTAGAATGGAAACAGGAAAGACTAGTCCTCAGTTGGATACAGTCTTGAAAGTTTTA
GCCAGTTTAGGAAAGACACTAGCAGTCGTCCCACTCGAACAGAAAAAAGGTTGA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(37-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

57.292

98.969

0.567

Multiple sequence alignment