Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   ACLV7H_RS07740 Genome accession   NZ_OZ217340
Coordinates   1493086..1493379 (-) Length   97 a.a.
NCBI ID   WP_061421306.1    Uniprot ID   -
Organism   Streptococcus oralis isolate S. oralis A22     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1488086..1498379
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7H_RS07730 (SORA22_15560) metF 1489505..1490371 (-) 867 WP_411867079.1 methylenetetrahydrofolate reductase [NAD(P)H] -
  ACLV7H_RS07735 (SORA22_15570) metE 1490465..1492714 (-) 2250 WP_411866827.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  ACLV7H_RS07740 (SORA22_15580) HI0659 1493086..1493379 (-) 294 WP_061421306.1 helix-turn-helix domain-containing protein Machinery gene
  ACLV7H_RS07745 (SORA22_15590) - 1493567..1493932 (-) 366 WP_411866828.1 TIGR02328 family protein -
  ACLV7H_RS07750 (SORA22_15600) - 1493916..1494320 (-) 405 WP_411866829.1 YbgA family protein -
  ACLV7H_RS07755 (SORA22_15610) - 1494402..1495178 (-) 777 WP_411866830.1 hypothetical protein -
  ACLV7H_RS07760 (SORA22_15620) - 1495305..1496738 (-) 1434 WP_411866831.1 hypothetical protein -
  ACLV7H_RS07765 (SORA22_15630) - 1496772..1497551 (-) 780 WP_411866832.1 abortive infection family protein -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10779.44 Da        Isoelectric Point: 5.1991

>NTDB_id=1169972 ACLV7H_RS07740 WP_061421306.1 1493086..1493379(-) (HI0659) [Streptococcus oralis isolate S. oralis A22]
MKNSAIGSNWKDVRTELFTKEEILESDMRVAIMSELIEARHEQGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVL
ASLGKTLAVVPLEQEKN

Nucleotide


Download         Length: 294 bp        

>NTDB_id=1169972 ACLV7H_RS07740 WP_061421306.1 1493086..1493379(-) (HI0659) [Streptococcus oralis isolate S. oralis A22]
ATGAAGAATAGTGCCATTGGAAGTAATTGGAAGGATGTCCGAACAGAACTCTTTACCAAGGAAGAAATTCTTGAAAGTGA
TATGCGAGTGGCTATTATGAGTGAGTTGATTGAGGCTAGACATGAGCAAGGTATCAGTCAGAAAAAGCTAGAGGAACTCA
GTGGAGTAAGCCAGCCTGTTATAGCTAGAATGGAGACAGGAAAGACTAGTCCTCAGTTGGATACGGTCTTAAAAGTCTTA
GCCAGTTTAGGAAAGACACTAGCAGTTGTTCCACTTGAACAGGAAAAAAATTGA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(37-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

59.341

93.814

0.557

Multiple sequence alignment