Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ACLV7H_RS01690 Genome accession   NZ_OZ217340
Coordinates   302807..303520 (-) Length   237 a.a.
NCBI ID   WP_084868933.1    Uniprot ID   -
Organism   Streptococcus oralis isolate S. oralis A22     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 297807..308520
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7H_RS01680 (SORA22_03290) mraY 298580..299560 (+) 981 WP_411866199.1 phospho-N-acetylmuramoyl-pentapeptide- transferase -
  ACLV7H_RS01685 (SORA22_03300) - 299707..302504 (-) 2798 Protein_297 glycosyl hydrolase family 95 catalytic domain-containing protein -
  ACLV7H_RS01690 (SORA22_03310) treR 302807..303520 (-) 714 WP_084868933.1 trehalose operon repressor Regulator
  ACLV7H_RS01695 (SORA22_03320) treP 303717..305684 (+) 1968 WP_411866200.1 PTS system trehalose-specific EIIBC component -
  ACLV7H_RS01700 (SORA22_03330) treC 305748..307373 (+) 1626 WP_411866201.1 alpha,alpha-phosphotrehalase -
  ACLV7H_RS01705 (SORA22_03340) - 307518..307763 (+) 246 WP_000364986.1 YneF family protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27785.88 Da        Isoelectric Point: 7.4563

>NTDB_id=1169944 ACLV7H_RS01690 WP_084868933.1 302807..303520(-) (treR) [Streptococcus oralis isolate S. oralis A22]
MKKYQQLFKQIQKTIQNETYAVGDFLPSEYELMNQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVQELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIEDDLKLHIDYAQKEITIDHTGDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFHFVDFAKRHPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1169944 ACLV7H_RS01690 WP_084868933.1 302807..303520(-) (treR) [Streptococcus oralis isolate S. oralis A22]
ATGAAGAAATACCAACAATTATTTAAGCAGATCCAAAAAACCATTCAAAACGAAACTTACGCTGTCGGAGATTTCCTCCC
CAGCGAGTACGAACTCATGAATCAGTATCAGGTGAGCCGTGACACCGTCCGAAAAGCTCTGTCCCTTCTCCAAGAAGAAG
GATTAATCAAAAAGATAAGGGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTCTCTAACCTAACC
AGCTACCAAGAACTGGTCCAGGAACTTGGACTCCGTTCTAAAACCAATGTGGTCAGTCTGGACAAGATCATTATCGATAA
AAAATCCTCACTGATAACCGGCTTTCCAGAGTTTCGGATGGTTTGGAAGGTGGTGCGTCAACGTGTGGTGGATGATTTGG
TATCCGTTCTGGATACGGACTATCTGGATATGGAACTAATCCCAAATCTCACTCGCCAAATCGCTGAGCAGTCTATCTAC
TCGTATATAGAGGACGACCTCAAACTCCATATTGATTATGCTCAGAAAGAAATTACCATTGACCATACGGGTGACCGAGA
TAAGATTCTCATGGACATTGGCAAAGACCCTTATGTTGTTTCAATCAAGTCAAAAGTCTATCTCCAAGACGGGCGCCAAT
TTCAGTTCACCGAAAGTCGGCATAAATTAGAAAAATTTCACTTTGTTGACTTTGCCAAAAGACATCCAAAATAA

Domains

Predicted by InterProScan.

UTRA domain (UTRA)

(89-226)

Bacterial regulatory proteins, gntR family (GntR)

(3-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

58.298

99.156

0.578

Multiple sequence alignment