Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   ACKWRP_RS21615 Genome accession   NZ_OZ205032
Coordinates   4195083..4195517 (-) Length   144 a.a.
NCBI ID   WP_000811492.1    Uniprot ID   A0A0G8EA73
Organism   Bacillus cereus biovar anthracis isolate BcbvaCA     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 4190083..4200517
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKWRP_RS21600 - 4190846..4191403 (+) 558 WP_000062076.1 PadR family transcriptional regulator -
  ACKWRP_RS21605 metE 4192332..4194620 (+) 2289 WP_001007628.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  ACKWRP_RS21610 comJ 4194657..4195046 (-) 390 WP_000424033.1 competence protein ComJ -
  ACKWRP_RS21615 nucA/comI 4195083..4195517 (-) 435 WP_000811492.1 DNA-entry nuclease Machinery gene
  ACKWRP_RS21620 - 4195754..4196503 (+) 750 WP_000388464.1 DUF3967 domain-containing protein -
  ACKWRP_RS21625 kinB 4196557..4197831 (-) 1275 WP_000420392.1 sporulation sensor histidine kinase KinB -
  ACKWRP_RS21630 - 4198143..4198343 (+) 201 WP_000929284.1 hypothetical protein -
  ACKWRP_RS21635 - 4198466..4199629 (+) 1164 WP_000434592.1 aminotransferase A -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16012.35 Da        Isoelectric Point: 8.4331

>NTDB_id=1169872 ACKWRP_RS21615 WP_000811492.1 4195083..4195517(-) (nucA/comI) [Bacillus cereus biovar anthracis isolate BcbvaCA]
MKQLKGIIISIIAILSILVAVYEVLVPEETSTKKTNAYDQVLEFPKERYPETGKHITDAIKEGHSEVCTIDRGGAADRRK
LSLAPYPSKKGYDRDEWPMAMCKEGGKGAHIEYISPADNRGAGSWVGNKLDKYPDGTRVKFDVK

Nucleotide


Download         Length: 435 bp        

>NTDB_id=1169872 ACKWRP_RS21615 WP_000811492.1 4195083..4195517(-) (nucA/comI) [Bacillus cereus biovar anthracis isolate BcbvaCA]
ATGAAGCAATTAAAAGGTATTATCATTTCAATTATTGCAATTCTTTCTATTTTAGTAGCGGTTTATGAAGTACTTGTTCC
AGAGGAAACAAGTACAAAAAAAACAAATGCGTATGATCAAGTTCTAGAATTTCCGAAAGAGAGATATCCAGAAACAGGGA
AACATATTACGGATGCGATAAAGGAAGGACATTCAGAAGTTTGTACAATCGACCGTGGTGGTGCTGCGGATAGAAGAAAG
TTATCGTTAGCTCCATACCCATCAAAAAAAGGGTATGATCGTGATGAATGGCCAATGGCAATGTGTAAAGAAGGCGGAAA
AGGAGCACATATCGAATATATAAGTCCAGCAGATAACCGCGGAGCAGGGTCTTGGGTAGGAAATAAGTTAGATAAATACC
CAGATGGTACGCGTGTGAAATTTGACGTAAAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(48-139)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0G8EA73

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

70.796

78.472

0.556

Multiple sequence alignment