Detailed information NTG1169854

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: ACKWRP_RS08055
• Genome accession: NZ_OZ205032
• Coordinates: 1560851..1563451 (+)
• Length: 866 a.a.
• NCBI ID: WP_000365371.1
• Uniprot ID: -
• Organism: Bacillus cereus biovar anthracis isolate BcbvaCA
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1555851..1568451

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKWRP_RS08015	-	1556309..1556572 (+)	264	WP_001199903.1	hypothetical protein	-
ACKWRP_RS08020	prsA	1556613..1557470 (-)	858	WP_001214192.1	peptidylprolyl isomerase PrsA	-
ACKWRP_RS08025	-	1557601..1557732 (-)	132	WP_001120845.1	DUF3941 domain-containing protein	-
ACKWRP_RS08030	-	1557833..1558690 (+)	858	WP_000364442.1	YitT family protein	-
ACKWRP_RS08035	-	1558716..1558913 (-)	198	WP_000527393.1	DUF3813 domain-containing protein	-
ACKWRP_RS08040	-	1558914..1559054 (-)	141	WP_000516816.1	hypothetical protein	-
ACKWRP_RS08045	-	1559160..1559969 (-)	810	WP_001041235.1	Cof-type HAD-IIB family hydrolase	-
ACKWRP_RS08050	-	1560461..1560640 (+)	180	WP_000531421.1	YjzC family protein	-
ACKWRP_RS08055	clpC	1560851..1563451 (+)	2601	WP_000365371.1	ATP-dependent chaperone ClpB	Regulator
ACKWRP_RS08060	-	1563485..1563667 (-)	183	WP_001211116.1	YjzD family protein	-
ACKWRP_RS08065	-	1563824..1564558 (+)	735	WP_000028701.1	hydrolase	-
ACKWRP_RS08070	-	1564588..1565460 (+)	873	WP_041183855.1	NAD-dependent epimerase/dehydratase family protein	-
ACKWRP_RS08075	comZ	1565514..1565690 (+)	177	WP_009879752.1	ComZ family protein	Regulator
ACKWRP_RS08080	fabH	1565924..1566856 (+)	933	WP_001100536.1	beta-ketoacyl-ACP synthase III	-
ACKWRP_RS08085	fabF	1566888..1568126 (+)	1239	WP_000412652.1	beta-ketoacyl-ACP synthase II	-

Sequence

Protein

• Length: 866 a.a.
• Molecular weight: 97541.53 Da
• Isoelectric Point: 5.1557

>NTDB_id=1169854 ACKWRP_RS08055 WP_000365371.1 1560851..1563451(+) (clpC) [Bacillus cereus biovar anthracis isolate BcbvaCA]
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEALKQGAENLIKKKPSVTGSGAE
AGKLYITGALQQLLVRAGKEAEKLQDDYISIEHVLLAFTEEKGDINQLFTRFHITKDNLLQSLMTVRGNQRVTSQNPEAT
YEALEKYGRDLVAEVRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHKVRDLRE
HLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLREEVSEEEIADIVSRWTGIPVAKLVEG
EREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHIT
VQLTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNSHVVVDVENNELVVHVK

Nucleotide

• Length: 2601 bp

>NTDB_id=1169854 ACKWRP_RS08055 WP_000365371.1 1560851..1563451(+) (clpC) [Bacillus cereus biovar anthracis isolate BcbvaCA]
ATGGACTTAAATCAAATGACAACAAAAACACAAGAGGCGATTATGAGTGCCCAATCTTTAGCGGTGTCTCATCATCATCA
AGAAGTAGATACTGTTCATCTCTTGTTTACATTATTAGAAGAGCAAGATGGGTTAGCAGTACGTATTTTTCAAAAAATGA
ATGTCGATATAGAAGCGTTAAAACAAGGCGCCGAAAATTTAATTAAGAAAAAGCCTTCCGTAACGGGAAGCGGTGCAGAA
GCAGGTAAATTATATATAACAGGTGCTCTGCAACAATTACTTGTAAGAGCGGGAAAAGAAGCAGAGAAATTGCAAGATGA
CTACATTTCAATTGAACATGTATTGCTTGCTTTTACTGAAGAAAAAGGCGATATAAATCAATTATTTACAAGATTTCATA
TTACGAAAGATAACTTATTACAGTCTTTAATGACAGTTCGGGGGAATCAAAGAGTGACTAGTCAAAATCCAGAAGCAACT
TATGAAGCGTTAGAAAAATATGGTCGTGATTTAGTGGCGGAAGTAAGAGCGGGGAAAATTGACCCTGTTATTGGCCGCGA
TAGTGAAATTCGCCGCGTAATCCGTATTCTTTCACGTAAAACGAAAAACAACCCGGTTTTAATTGGGGAACCGGGTGTAG
GTAAAACAGCAATCGTTGAAGGGTTAGCACAGCGTATTGTGAAAAAGGACGTACCAGAAGGATTAAAAGATAGAACAATT
TTTGCGTTAGATATGAGTGCGCTTGTAGCCGGTGCGAAATTCCGCGGTGAGTTTGAGGAGCGTCTCCAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGTCGTATTTTACTATTCATTGATGAACTTCACACAATCGTCGGCGCTGGTAAAACAGAAG
GCGCAATGGATGCAGGAAATATGTTAAAACCGATGCTTGCGCGTGGTGAACTGCATTGTATCGGGGCGACGACGTTAGAT
GAATATCGTAAATATATTGAGAAAGATCCAGCGCTAGAAAGACGTTTCCAACAAGTATTAGCAGAAGAACCAACTGTTGA
AGATACAATTTCTATTTTACGTGGTTTAAAAGAGCGCTTTGAAATTTATCACGGTGTAAATATTCATGACCGCGCGATTG
TAGCAGCATCAGTTTTATCAGATCGGTATATTTCGGATCGTTTCTTACCGGATAAAGCCATTGATCTTGTTGACGAAGCG
TGCGCAACAATTCGTACAGAAATTGATTCTATGCCAACAGAATTAGATGAAGTAACGCGCCGCATTATGCAGCTGGAAAT
TGAAGAAGCAGCTCTTGGAAAAGAGAAAGACTTTGGTAGCCAAGAACGTCTAAAAACATTGCAACGTGAATTATCGGATT
TAAAAGAAGTGGCAAGTGGCATGAGAGCCAAATGGGAGAAAGAAAAAGAAGATATTCACAAAGTTCGTGACTTACGTGAA
CATTTAGAGCGTCTGCGCCGTGAATTAGAAGAAGCAGAAGGTAATTACGACTTAAATAGAGCAGCGGAACTTCGCCACGG
AAAAATTCCTGCAATTGAAAAAGAGTTAAAAGAAGCAGAAGAAATGGGCGCGAATAATAAACAAGAAAATCGTTTATTAC
GTGAGGAAGTAAGTGAAGAAGAGATTGCTGATATTGTTTCACGCTGGACTGGTATTCCTGTCGCAAAACTCGTTGAAGGT
GAACGTGAGAAATTATTACGATTAGAGCAAATTTTATCAGAGCGTGTTATCGGACAAGAAGAAGCGGTAAGCCTAGTATC
AGACGCAGTTCTTCGTGCTCGTGCTGGTATTAAAGACCCGAACCGTCCAATTGGTTCCTTCATCTTCTTAGGACCGACTG
GTGTTGGTAAAACAGAACTTGCAAAAACGTTGGCGCAGTCTTTATTTGATAGTGAAGAGCAAATGATTCGTATTGATATG
TCTGAGTACATGGAGAAACACGCTGTGTCACGCTTAATTGGTGCACCTCCTGGATATGTTGGATATGAAGAGGGCGGTCA
ATTAACAGAAGCAGTAAGACGTAAACCGTATTCTGTTATTTTGTTAGATGAAATCGAAAAAGCACATCCAGAAGTATTCA
ACATTTTATTACAAATGTTAGATGACGGACGCATTACAGATTCGCAAGGACGTACAGTAGACTTTAAAAACACAGTTATT
ATTATGACGTCAAATATTGGATCTGCTCATTTATTAGATGGATTAGAAGAAGATGGCTCTATTAAAGAAGAATCAAGAGA
ACTTGTAATGGGGCAATTAAGAGGGCATTTCCGACCAGAGTTTTTAAACCGCGTCGACGAAATTATTTTATTCAAACCTC
TTACAACGAATGAAATTAAAGGTATTGTTGATAAAATTGTAAAAGAATTACAAGGTCGTTTAGCTGACCGTCATATTACG
GTACAATTAACAGACGCGGCAAAAGAATTTGTTGTAGAAGCTGGCTTTGATCCGATGTACGGAGCTCGTCCATTAAAACG
ATATGTACAGCGTCAAGTTGAAACGAAATTAGCGAGAGAATTAATTGCAGGTACGATTACTGACAATAGTCATGTAGTGG
TTGATGTAGAAAATAACGAATTAGTCGTTCATGTGAAATAA

Domains

Predicted by InterproScan.

• AAA lid domain (AAA_lid_9) (345-447)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (774-854)

• ATPase family associated with various cellular activities (AAA) (AAA) (206-339)

• AAA domain (Cdc48 subfamily) (AAA_2) (602-768)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (97-148)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (17-68)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Bacillus subtilis subsp. subtilis str. 168	47.543	100	0.48
clpC	Lactococcus lactis subsp. cremoris KW2	47.199	82.448	0.389