Detailed information NTG1169781

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: ACH8EH_RS09965
• Genome accession: NZ_OZ197914
• Coordinates: 1897869..1900982 (-)
• Length: 1037 a.a.
• NCBI ID: WP_395372697.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae isolate SGC-24-002
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1892869..1905982

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACH8EH_RS09955	-	1892952..1894178 (+)	1227	WP_395372695.1	PilT/PilU family type 4a pilus ATPase	-
ACH8EH_RS09960	yccS	1894295..1896445 (+)	2151	WP_003697785.1	YccS family putative transporter	-
ACH8EH_RS09965	pilC	1897869..1900982 (-)	3114	WP_395372697.1	PilC family type IV pilus tip adhesin	Machinery gene
ACH8EH_RS09970	-	1901670..1901933 (+)	264	WP_017147189.1	hypothetical protein	-
ACH8EH_RS09975	gnd	1902013..1903461 (+)	1449	WP_003688061.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	-
ACH8EH_RS09980	waaA	1903524..1904795 (+)	1272	WP_025455875.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
ACH8EH_RS09985	-	1904836..1905285 (+)	450	WP_003688065.1	CopD family copper resistance protein	-

Sequence

Protein

• Length: 1037 a.a.
• Molecular weight: 113090.70 Da
• Isoelectric Point: 9.9072

>NTDB_id=1169781 ACH8EH_RS09965 WP_395372697.1 1897869..1900982(-) (pilC) [Neisseria gonorrhoeae isolate SGC-24-002]
MNKTLKRQVFRHTALYTAILMFSHTGGGGAMAQTHQYAIIMNGRNQPEVKSNVPSSIKDKDRKRTFSHTSQKNSLGITSN
FISFNNNDTLVSQQSGTAVFGTATYLPPYGKVSGFDADGLKKRNNAVDWIRTTRIALAGYSYEGVVCRSGTGCPKLVYKT
RFSFDNSDLVKNAGKLDRYTDLSRENSPIYKLKDYPWLGVSFNLSSENTVKDSKLSNKLISSFSESNNNQTIVSTTEDHP
ISLGGSQREHTAVAYYLNAKLHLLDKKGIGDIAPGKTVRLGLLKPSIDVRKGNTGLSGILSFNATWDIKDTGQIPVKLGL
QVKAGRCINKPNPNKNTKAPSPALTAPALWFGPRQDGKVQMYSASVSTYPDSSSSKIFLQNLSRNDDKNKPGRYSLKPLS
ENEIKSKEPSFMGRQTIIRLDDGVHLIRLSRSKDEVAAFVNLNGNNTGKNDTFGIVKEANVNLDADEWKKVLLPWTVRGP
DNDNKFKSINQKPEKYSQRYRIRDNNGNRDLGDIVNSPIVAVGGYLATAANDGMVHIFKKNGGSDERSYNLKLSYIPGTM
PRKDIQSQESTLAKELRAFAEKGYVGDRYGVDGGFVLRQVELSGQKHVFMFGAMGFGGRGAYALDLSKINGNYPAAAPLF
DVKDGDNNGKNRVKVELGYTVGTPQIGKIRNGKYAAFLASGYAAKKIDDSTNKTALYVYDLKDTLGTPIAKIEVKDGKGG
LSSPTLVDKDLDGTVDIAYAGDRGGNMYRFDLSSDKPSEWTVRTIFEGGKPITSAPAVSRLADKRVVIFGTGSDLSEEDV
VDTKEQYIYGIFDDDKPTVNVKVTNGTGGGLLEQNLTQENKTLFLTNNKASGGSADKGWVVKLMDGERVTVKPTVVLRTA
FVTIRKYKDDGCGAETAILGINTADGGALTPRSARPIVPEANKDVAQYSGHKTAGGKSVPIGCMWKNSKTVCPNGYVYDK
PVNVRYLDETETDGFSTTADGDAGGSGIDPAGRRPGKNNRCFSKKGVRTLLMNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 3114 bp

>NTDB_id=1169781 ACH8EH_RS09965 WP_395372697.1 1897869..1900982(-) (pilC) [Neisseria gonorrhoeae isolate SGC-24-002]
ATGAATAAAACTTTGAAAAGGCAGGTTTTCCGCCATACCGCGCTTTATACCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGCGATGGCGCAAACCCATCAATACGCTATTATCATGAACGGGCGAAACCAGCCCGAGGTAAAGTCGAATGTGC
CATCTTCAATAAAGGACAAAGACAGGAAGCGGACATTTAGCCATACGAGCCAGAAAAACAGCCTCGGCATCACAAGCAAT
TTTATCTCATTCAACAATAACGATACCCTTGTTTCTCAACAAAGCGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCC
GCCCTACGGCAAGGTTTCCGGTTTTGATGCCGACGGGCTGAAAAAGCGCAACAATGCCGTTGATTGGATTCGTACCACCC
GCATCGCGCTGGCAGGCTACAGCTACGAAGGTGTCGTATGCAGAAGCGGCACAGGCTGTCCCAAACTTGTCTATAAAACC
CGATTTTCCTTCGATAATTCCGACTTGGTAAAAAATGCGGGCAAGCTGGATAGGTACACAGACCTAAGCCGCGAAAATTC
GCCCATTTACAAATTGAAGGATTATCCATGGTTGGGCGTATCTTTCAATTTGAGCAGCGAGAATACCGTCAAAGATAGCA
AATTATCCAACAAATTGATATCTTCTTTTAGTGAAAGCAATAATAATCAAACCATCGTCTCTACGACAGAAGACCACCCT
ATTTCCCTTGGCGGCTCGCAGCGCGAACATACCGCCGTGGCCTATTATCTGAACGCCAAACTGCACCTGCTGGATAAAAA
AGGGATTGGAGATATCGCGCCAGGCAAAACAGTGCGGTTGGGTCTCTTGAAGCCGAGCATCGATGTGCGGAAAGGAAATA
CGGGGCTTAGCGGCATTCTATCTTTTAATGCTACGTGGGACATTAAAGATACCGGGCAGATTCCGGTCAAGCTCGGCCTG
CAAGTCAAAGCAGGCCGCTGCATCAATAAACCGAACCCCAATAAGAATACCAAAGCCCCTTCGCCGGCACTGACCGCCCC
CGCGCTGTGGTTCGGACCTAGGCAAGATGGTAAGGTGCAGATGTATTCCGCTTCGGTTTCCACCTACCCCGACAGTTCGA
GCAGCAAAATTTTCCTGCAAAACCTTTCCCGCAATGATGACAAAAACAAACCGGGCCGCTATTCCCTCAAACCCTTGAGT
GAGAATGAGATTAAAAGTAAAGAGCCGAGTTTCATGGGGCGGCAAACAATCATCCGATTGGATGACGGCGTACATTTGAT
CAGACTGAGTAGAAGCAAGGATGAGGTCGCCGCTTTTGTCAATTTAAATGGAAACAACACCGGCAAAAACGACACTTTCG
GCATTGTTAAGGAAGCGAACGTCAATCTTGACGCCGACGAGTGGAAAAAAGTGCTGCTGCCTTGGACGGTTCGGGGTCCC
GATAATGACAATAAATTTAAATCAATTAACCAAAAACCAGAAAAATACAGCCAAAGATACCGCATCCGCGACAACAACGG
CAATCGCGATTTGGGCGACATCGTCAACAGCCCGATTGTCGCGGTCGGCGGGTATTTGGCAACCGCCGCGAACGACGGGA
TGGTGCATATCTTCAAAAAAAACGGCGGCAGTGATGAACGCAGCTACAATCTGAAGCTCAGCTACATCCCCGGCACGATG
CCGCGCAAGGATATTCAAAGCCAAGAATCCACCCTTGCCAAAGAGCTGCGCGCCTTTGCCGAAAAAGGCTATGTGGGCGA
CCGCTACGGCGTGGACGGCGGCTTTGTCTTGCGCCAAGTCGAACTGAGCGGGCAAAAACACGTGTTTATGTTCGGCGCGA
TGGGTTTTGGCGGCAGGGGCGCGTATGCCTTGGATTTAAGCAAAATCAACGGAAATTATCCGGCCGCCGCCCCCCTGTTT
GATGTCAAAGATGGCGATAATAACGGCAAAAATCGCGTGAAAGTGGAATTAGGCTACACCGTCGGTACGCCGCAAATCGG
CAAAATCCGCAACGGCAAATACGCCGCCTTCCTCGCCTCCGGTTATGCGGCTAAAAAAATTGACGACTCAACAAATAAAA
CCGCGCTGTATGTATATGATTTGAAAGACACCTTAGGTACGCCGATTGCAAAAATCGAAGTGAAGGACGGCAAAGGCGGG
CTTTCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCACGGTCGATATCGCCTATGCCGGCGACCGGGGCGGCAATAT
GTACCGCTTTGATTTGAGCAGCGACAAGCCGTCCGAGTGGACTGTACGCACTATTTTCGAAGGCGGGAAGCCGATTACCT
CCGCGCCCGCCGTTTCCCGACTGGCAGACAAACGCGTGGTTATCTTCGGCACGGGCAGCGATTTGAGTGAAGAGGATGTA
GTCGATACGAAAGAACAATATATTTACGGTATCTTTGACGACGATAAGCCGACGGTTAATGTAAAGGTAACAAACGGCAC
GGGAGGCGGGCTGCTCGAGCAAAACCTTACGCAGGAAAATAAAACCTTGTTCCTGACAAATAATAAGGCATCCGGCGGAT
CGGCCGATAAAGGCTGGGTAGTGAAATTGATGGACGGAGAACGCGTTACCGTCAAACCGACCGTGGTATTGCGTACCGCC
TTCGTAACCATCCGCAAATATAAAGACGACGGCTGCGGCGCGGAAACCGCCATTTTGGGCATCAATACCGCCGACGGCGG
CGCATTGACTCCGAGAAGCGCGCGCCCGATTGTGCCGGAAGCCAATAAGGATGTCGCACAATATTCCGGCCATAAGACAG
CCGGCGGCAAGTCCGTCCCCATAGGCTGCATGTGGAAAAACAGCAAAACCGTCTGCCCGAACGGATATGTTTACGACAAG
CCGGTTAATGTGCGTTATCTGGATGAAACGGAAACAGACGGATTTTCAACGACGGCGGACGGCGATGCGGGCGGCAGCGG
TATAGACCCCGCCGGCAGGCGTCCCGGCAAAAACAACCGCTGCTTCTCCAAAAAAGGGGTGCGCACCCTGCTGATGAACG
ATTTGGACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (511-849)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	73.435	100	0.746