Detailed information NTG1169696

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: ACH8EK_RS00005
• Genome accession: NZ_OZ197910
• Coordinates: 198..3311 (-)
• Length: 1037 a.a.
• NCBI ID: WP_395372697.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae isolate SGC-24-001
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1..8311

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACH8EK_RS00005	pilC	198..3311 (-)	3114	WP_395372697.1	PilC family type IV pilus tip adhesin	Machinery gene
ACH8EK_RS00010	-	3999..4262 (+)	264	WP_017147189.1	hypothetical protein	-
ACH8EK_RS00015	gnd	4342..5790 (+)	1449	WP_003688061.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	-
ACH8EK_RS00020	waaA	5853..7124 (+)	1272	WP_025455875.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
ACH8EK_RS00025	-	7165..7614 (+)	450	WP_003688065.1	CopD family copper resistance protein	-

Sequence

Protein

• Length: 1037 a.a.
• Molecular weight: 113090.70 Da
• Isoelectric Point: 9.9072

>NTDB_id=1169696 ACH8EK_RS00005 WP_395372697.1 198..3311(-) (pilC) [Neisseria gonorrhoeae isolate SGC-24-001]
MNKTLKRQVFRHTALYTAILMFSHTGGGGAMAQTHQYAIIMNGRNQPEVKSNVPSSIKDKDRKRTFSHTSQKNSLGITSN
FISFNNNDTLVSQQSGTAVFGTATYLPPYGKVSGFDADGLKKRNNAVDWIRTTRIALAGYSYEGVVCRSGTGCPKLVYKT
RFSFDNSDLVKNAGKLDRYTDLSRENSPIYKLKDYPWLGVSFNLSSENTVKDSKLSNKLISSFSESNNNQTIVSTTEDHP
ISLGGSQREHTAVAYYLNAKLHLLDKKGIGDIAPGKTVRLGLLKPSIDVRKGNTGLSGILSFNATWDIKDTGQIPVKLGL
QVKAGRCINKPNPNKNTKAPSPALTAPALWFGPRQDGKVQMYSASVSTYPDSSSSKIFLQNLSRNDDKNKPGRYSLKPLS
ENEIKSKEPSFMGRQTIIRLDDGVHLIRLSRSKDEVAAFVNLNGNNTGKNDTFGIVKEANVNLDADEWKKVLLPWTVRGP
DNDNKFKSINQKPEKYSQRYRIRDNNGNRDLGDIVNSPIVAVGGYLATAANDGMVHIFKKNGGSDERSYNLKLSYIPGTM
PRKDIQSQESTLAKELRAFAEKGYVGDRYGVDGGFVLRQVELSGQKHVFMFGAMGFGGRGAYALDLSKINGNYPAAAPLF
DVKDGDNNGKNRVKVELGYTVGTPQIGKIRNGKYAAFLASGYAAKKIDDSTNKTALYVYDLKDTLGTPIAKIEVKDGKGG
LSSPTLVDKDLDGTVDIAYAGDRGGNMYRFDLSSDKPSEWTVRTIFEGGKPITSAPAVSRLADKRVVIFGTGSDLSEEDV
VDTKEQYIYGIFDDDKPTVNVKVTNGTGGGLLEQNLTQENKTLFLTNNKASGGSADKGWVVKLMDGERVTVKPTVVLRTA
FVTIRKYKDDGCGAETAILGINTADGGALTPRSARPIVPEANKDVAQYSGHKTAGGKSVPIGCMWKNSKTVCPNGYVYDK
PVNVRYLDETETDGFSTTADGDAGGSGIDPAGRRPGKNNRCFSKKGVRTLLMNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 3114 bp

>NTDB_id=1169696 ACH8EK_RS00005 WP_395372697.1 198..3311(-) (pilC) [Neisseria gonorrhoeae isolate SGC-24-001]
ATGAATAAAACTTTGAAAAGGCAGGTTTTCCGCCATACCGCGCTTTATACCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGCGATGGCGCAAACCCATCAATACGCTATTATCATGAACGGGCGAAACCAGCCCGAGGTAAAGTCGAATGTGC
CATCTTCAATAAAGGACAAAGACAGGAAGCGGACATTTAGCCATACGAGCCAGAAAAACAGCCTCGGCATCACAAGCAAT
TTTATCTCATTCAACAATAACGATACCCTTGTTTCTCAACAAAGCGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCC
GCCCTACGGCAAGGTTTCCGGTTTTGATGCCGACGGGCTGAAAAAGCGCAACAATGCCGTTGATTGGATTCGTACCACCC
GCATCGCGCTGGCAGGCTACAGCTACGAAGGTGTCGTATGCAGAAGCGGCACAGGCTGTCCCAAACTTGTCTATAAAACC
CGATTTTCCTTCGATAATTCCGACTTGGTAAAAAATGCGGGCAAGCTGGATAGGTACACAGACCTAAGCCGCGAAAATTC
GCCCATTTACAAATTGAAGGATTATCCATGGTTGGGCGTATCTTTCAATTTGAGCAGCGAGAATACCGTCAAAGATAGCA
AATTATCCAACAAATTGATATCTTCTTTTAGTGAAAGCAATAATAATCAAACCATCGTCTCTACGACAGAAGACCACCCT
ATTTCCCTTGGCGGCTCGCAGCGCGAACATACCGCCGTGGCCTATTATCTGAACGCCAAACTGCACCTGCTGGATAAAAA
AGGGATTGGAGATATCGCGCCAGGCAAAACAGTGCGGTTGGGTCTCTTGAAGCCGAGCATCGATGTGCGGAAAGGAAATA
CGGGGCTTAGCGGCATTCTATCTTTTAATGCTACGTGGGACATTAAAGATACCGGGCAGATTCCGGTCAAGCTCGGCCTG
CAAGTCAAAGCAGGCCGCTGCATCAATAAACCGAACCCCAATAAGAATACCAAAGCCCCTTCGCCGGCACTGACCGCCCC
CGCGCTGTGGTTCGGACCTAGGCAAGATGGTAAGGTGCAGATGTATTCCGCTTCGGTTTCCACCTACCCCGACAGTTCGA
GCAGCAAAATTTTCCTGCAAAACCTTTCCCGCAATGATGACAAAAACAAACCGGGCCGCTATTCCCTCAAACCCTTGAGT
GAGAATGAGATTAAAAGTAAAGAGCCGAGTTTCATGGGGCGGCAAACAATCATCCGATTGGATGACGGCGTACATTTGAT
CAGACTGAGTAGAAGCAAGGATGAGGTCGCCGCTTTTGTCAATTTAAATGGAAACAACACCGGCAAAAACGACACTTTCG
GCATTGTTAAGGAAGCGAACGTCAATCTTGACGCCGACGAGTGGAAAAAAGTGCTGCTGCCTTGGACGGTTCGGGGTCCC
GATAATGACAATAAATTTAAATCAATTAACCAAAAACCAGAAAAATACAGCCAAAGATACCGCATCCGCGACAACAACGG
CAATCGCGATTTGGGCGACATCGTCAACAGCCCGATTGTCGCGGTCGGCGGGTATTTGGCAACCGCCGCGAACGACGGGA
TGGTGCATATCTTCAAAAAAAACGGCGGCAGTGATGAACGCAGCTACAATCTGAAGCTCAGCTACATCCCCGGCACGATG
CCGCGCAAGGATATTCAAAGCCAAGAATCCACCCTTGCCAAAGAGCTGCGCGCCTTTGCCGAAAAAGGCTATGTGGGCGA
CCGCTACGGCGTGGACGGCGGCTTTGTCTTGCGCCAAGTCGAACTGAGCGGGCAAAAACACGTGTTTATGTTCGGCGCGA
TGGGTTTTGGCGGCAGGGGCGCGTATGCCTTGGATTTAAGCAAAATCAACGGAAATTATCCGGCCGCCGCCCCCCTGTTT
GATGTCAAAGATGGCGATAATAACGGCAAAAATCGCGTGAAAGTGGAATTAGGCTACACCGTCGGTACGCCGCAAATCGG
CAAAATCCGCAACGGCAAATACGCCGCCTTCCTCGCCTCCGGTTATGCGGCTAAAAAAATTGACGACTCAACAAATAAAA
CCGCGCTGTATGTATATGATTTGAAAGACACCTTAGGTACGCCGATTGCAAAAATCGAAGTGAAGGACGGCAAAGGCGGG
CTTTCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCACGGTCGATATCGCCTATGCCGGCGACCGGGGCGGCAATAT
GTACCGCTTTGATTTGAGCAGCGACAAGCCGTCCGAGTGGACTGTACGCACTATTTTCGAAGGCGGGAAGCCGATTACCT
CCGCGCCCGCCGTTTCCCGACTGGCAGACAAACGCGTGGTTATCTTCGGCACGGGCAGCGATTTGAGTGAAGAGGATGTA
GTCGATACGAAAGAACAATATATTTACGGTATCTTTGACGACGATAAGCCGACGGTTAATGTAAAGGTAACAAACGGCAC
GGGAGGCGGGCTGCTCGAGCAAAACCTTACGCAGGAAAATAAAACCTTGTTCCTGACAAATAATAAGGCATCCGGCGGAT
CGGCCGATAAAGGCTGGGTAGTGAAATTGATGGACGGAGAACGCGTTACCGTCAAACCGACCGTGGTATTGCGTACCGCC
TTCGTAACCATCCGCAAATATAAAGACGACGGCTGCGGCGCGGAAACCGCCATTTTGGGCATCAATACCGCCGACGGCGG
CGCATTGACTCCGAGAAGCGCGCGCCCGATTGTGCCGGAAGCCAATAAGGATGTCGCACAATATTCCGGCCATAAGACAG
CCGGCGGCAAGTCCGTCCCCATAGGCTGCATGTGGAAAAACAGCAAAACCGTCTGCCCGAACGGATATGTTTACGACAAG
CCGGTTAATGTGCGTTATCTGGATGAAACGGAAACAGACGGATTTTCAACGACGGCGGACGGCGATGCGGGCGGCAGCGG
TATAGACCCCGCCGGCAGGCGTCCCGGCAAAAACAACCGCTGCTTCTCCAAAAAAGGGGTGCGCACCCTGCTGATGAACG
ATTTGGACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (511-849)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	73.435	100	0.746