Detailed information    

insolico Bioinformatically predicted

Overview


Name   hns   Type   Regulator
Locus tag   ACNUEH_RS05145 Genome accession   NZ_OZ197095
Coordinates   1068656..1068982 (+) Length   108 a.a.
NCBI ID   WP_000801427.1    Uniprot ID   N9J3X5
Organism   Acinetobacter baumannii isolate 23S01404-6     
Function   repress the expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1063656..1073982
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNUEH_RS05120 hemC 1064273..1065190 (+) 918 WP_002159654.1 hydroxymethylbilane synthase -
  ACNUEH_RS05125 - 1065195..1065962 (+) 768 WP_032030850.1 uroporphyrinogen-III synthase -
  ACNUEH_RS05130 - 1065971..1066810 (+) 840 WP_032030849.1 hypothetical protein -
  ACNUEH_RS05135 - 1066820..1068013 (+) 1194 WP_000681780.1 membrane protein -
  ACNUEH_RS05140 - 1068021..1068461 (+) 441 WP_000661569.1 acyl-CoA thioesterase -
  ACNUEH_RS05145 hns 1068656..1068982 (+) 327 WP_000801427.1 H-NS family nucleoid-associated regulatory protein Regulator
  ACNUEH_RS05150 gspN 1069315..1070058 (+) 744 WP_000730343.1 type II secretion system protein N -
  ACNUEH_RS05155 - 1070058..1070894 (+) 837 WP_000870027.1 type II secretion system protein N -
  ACNUEH_RS05160 gspD 1070936..1073212 (+) 2277 WP_057065344.1 type II secretion system secretin GspD -
  ACNUEH_RS05165 - 1073253..1073882 (+) 630 WP_032060424.1 FHA domain-containing protein -

Sequence


Protein


Download         Length: 108 a.a.        Molecular weight: 12462.12 Da        Isoelectric Point: 5.0524

>NTDB_id=1169442 ACNUEH_RS05145 WP_000801427.1 1068656..1068982(+) (hns) [Acinetobacter baumannii isolate 23S01404-6]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI

Nucleotide


Download         Length: 327 bp        

>NTDB_id=1169442 ACNUEH_RS05145 WP_000801427.1 1068656..1068982(+) (hns) [Acinetobacter baumannii isolate 23S01404-6]
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAAATTGCTGAAAATGTAGGTTTTAGTGTTGAACAGCTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACTGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA

Domains


Predicted by InterproScan.

(12-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB N9J3X5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hns Acinetobacter baumannii strain A118

100

100

1


Multiple sequence alignment