Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   ACNUEH_RS01455 Genome accession   NZ_OZ197095
Coordinates   311096..311980 (-) Length   294 a.a.
NCBI ID   WP_000914774.1    Uniprot ID   N9LGJ0
Organism   Acinetobacter baumannii isolate 23S01404-6     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 306096..316980
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNUEH_RS01440 miaB 307943..309394 (+) 1452 WP_032060132.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -
  ACNUEH_RS01445 - 309432..310520 (+) 1089 WP_057065919.1 PhoH family protein -
  ACNUEH_RS01450 ybeY 310530..311006 (+) 477 WP_000703571.1 rRNA maturation RNase YbeY -
  ACNUEH_RS01455 tonB2 311096..311980 (-) 885 WP_000914774.1 energy transducer TonB Machinery gene
  ACNUEH_RS01460 - 312211..312882 (+) 672 WP_416632282.1 hypothetical protein -
  ACNUEH_RS01465 - 313040..313753 (+) 714 WP_000201544.1 DUF3108 domain-containing protein -
  ACNUEH_RS01470 - 313826..314401 (+) 576 WP_000543071.1 xanthine phosphoribosyltransferase -
  ACNUEH_RS01475 wrbA 314454..315047 (-) 594 WP_001183355.1 NAD(P)H:quinone oxidoreductase -
  ACNUEH_RS01480 - 315335..316582 (+) 1248 WP_000893466.1 YihY family inner membrane protein -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33622.48 Da        Isoelectric Point: 9.0935

>NTDB_id=1169424 ACNUEH_RS01455 WP_000914774.1 311096..311980(-) (tonB2) [Acinetobacter baumannii isolate 23S01404-6]
MLKKRSLSIEPFYYWWQDRVFIAAIILAILLHIFVLLIHFAMPAPSEQSTKEIAISIRPTEDVIKHADFLAQADQQGSGA
FREAHRMSSNSPAPMPSDASTGEAQLETLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHPVLDEAAKASVRRGAPFGRFDANMKDISELRIIRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=1169424 ACNUEH_RS01455 WP_000914774.1 311096..311980(-) (tonB2) [Acinetobacter baumannii isolate 23S01404-6]
ATGTTGAAAAAAAGAAGTCTATCCATAGAGCCTTTTTATTATTGGTGGCAAGACCGAGTCTTTATCGCTGCAATAATATT
AGCAATCTTACTGCATATTTTTGTGTTGCTCATCCATTTTGCGATGCCTGCGCCGTCAGAACAATCGACTAAAGAAATTG
CAATATCGATTCGTCCTACTGAAGATGTAATCAAGCATGCAGACTTTCTAGCTCAAGCCGATCAACAAGGTTCAGGGGCT
TTTCGGGAAGCTCATCGGATGTCGAGTAACTCTCCAGCGCCTATGCCAAGTGATGCTTCAACAGGAGAAGCTCAGCTAGA
AACTTTAGAAAAAGTGCAGCAACAAAGAGAACTTAAATTTGAAGAAAAAGTACTCATGACTGTATTGAGTTGGCAGAAAC
AAGCAGAGGAGAGCCAAAGAAAAAAAGCACTTGAACAATTACAAAGTCAGTTTCAGGCAAAAGCTGCCATGGTGGCGAGT
CTTGAAGCTCAGTATTTACAACGTCAGCAAGATTTTAGTCGCCAACAAAAAATAAAAACAGTAGATGGTATTCAAGCCAA
GAAAGATGCGTCGGCAGCTTATCTAGATAAATTTCGTGAAAAAGTAGAGCTTTATGGCAACCGTTATTATCCAGAAGAAG
CGAAACAGCAACAGTTAAAAGGTGAAGTTCGCCTTATGGTAATTTTGAATGCTCAAGGGGGAATTCGTGCAATTCGTTTG
CTTGAAAGCTCAGGTCATCCAGTTCTAGATGAAGCAGCAAAGGCATCGGTACGGCGTGGAGCGCCGTTTGGTCGTTTTGA
TGCAAATATGAAAGATATTTCAGAGCTTCGTATTATTCGTACATGGCGTTTTGATCCAGCTGAAGCTGAATTTGAAGTTC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9LGJ0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

100

100

1

Multiple sequence alignment