Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   ACNUDR_RS00595 Genome accession   NZ_OZ197086
Coordinates   121755..122798 (+) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus isolate 23S01549-1     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 116755..127798
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNUDR_RS00565 - 117370..117480 (+) 111 WP_014937049.1 hypothetical protein -
  ACNUDR_RS00570 - 117509..117922 (+) 414 WP_025174370.1 hypothetical protein -
  ACNUDR_RS00575 - 118111..119097 (-) 987 WP_000999712.1 FUSC family protein -
  ACNUDR_RS00580 map 119681..120439 (+) 759 WP_000636145.1 type I methionyl aminopeptidase -
  ACNUDR_RS00585 - 120656..121042 (+) 387 WP_001110182.1 hypothetical protein -
  ACNUDR_RS00590 liaF 121057..121758 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  ACNUDR_RS00595 vraS 121755..122798 (+) 1044 WP_001017131.1 sensor histidine kinase Regulator
  ACNUDR_RS00600 vraR 122788..123417 (+) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  ACNUDR_RS00605 - 123530..124747 (-) 1218 WP_000037081.1 YihY/virulence factor BrkB family protein -
  ACNUDR_RS00610 - 125025..125300 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  ACNUDR_RS00615 - 125307..125771 (-) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  ACNUDR_RS00620 - 125918..126118 (+) 201 WP_000180460.1 DUF1128 family protein -
  ACNUDR_RS00625 - 126121..127377 (+) 1257 WP_074347694.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=1169041 ACNUDR_RS00595 WP_001017131.1 121755..122798(+) (vraS) [Staphylococcus aureus isolate 23S01549-1]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=1169041 ACNUDR_RS00595 WP_001017131.1 121755..122798(+) (vraS) [Staphylococcus aureus isolate 23S01549-1]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTTCTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAATTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAATTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGCTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment