Detailed information NTG1168892

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: ACNUD3_RS05725
• Genome accession: NZ_OZ197082
• Coordinates: 1148375..1148821 (-)
• Length: 148 a.a.
• NCBI ID: WP_001796473.1
• Uniprot ID: -
• Organism: Staphylococcus aureus isolate 23S00051-1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	1146312..1147483	1148375..1148821	flank	892

Gene organization within MGE regions

Location: 1146312..1148821

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNUD3_RS05710	-	1146312..1147483 (-)	1172	Protein_1086	IS256 family transposase	-
ACNUD3_RS05715	comGF	1147674..1148171 (-)	498	WP_001825340.1	competence type IV pilus minor pilin ComGF	Machinery gene
ACNUD3_RS05720	comGE	1148089..1148388 (-)	300	WP_000844413.1	hypothetical protein	Machinery gene
ACNUD3_RS05725	comGD	1148375..1148821 (-)	447	WP_001796473.1	competence type IV pilus minor pilin ComGD	Machinery gene

Sequence

Protein

• Length: 148 a.a.
• Molecular weight: 17131.31 Da
• Isoelectric Point: 10.3312

>NTDB_id=1168892 ACNUD3_RS05725 WP_001796473.1 1148375..1148821(-) (comGD) [Staphylococcus aureus isolate 23S00051-1]
MEKQLQIRKQSAFTMIEMLVVMMLISIFLLLTMTSKGLSNLRVIDDEANIISLITELNYIKSQAIANQGYINVRFYENSD
TIKVIENNKIRFLKLKVGKIINVAKVDIIAFDKKGNINKFGSITIDNNNSIYRIIFHIEKGRIRYEKL

Nucleotide

• Length: 447 bp

>NTDB_id=1168892 ACNUD3_RS05725 WP_001796473.1 1148375..1148821(-) (comGD) [Staphylococcus aureus isolate 23S00051-1]
ATGGAGAAGCAGTTGCAAATTAGAAAGCAGTCAGCATTTACTATGATTGAAATGCTTGTGGTAATGATGTTAATCAGTAT
ATTTTTACTTTTGACAATGACATCTAAAGGATTAAGCAATCTTAGAGTAATAGATGATGAGGCAAATATCATTTCTCTTA
TTACTGAATTGAATTATATTAAGTCGCAAGCTATAGCAAATCAAGGATATATCAATGTTAGATTTTATGAAAACAGTGAC
ACAATTAAAGTAATAGAGAATAATAAAATACGATTTCTAAAATTAAAAGTAGGCAAAATAATTAATGTTGCAAAAGTTGA
TATTATTGCCTTTGATAAAAAAGGGAATATCAATAAATTTGGTAGCATAACAATTGACAATAACAATTCAATTTATAGAA
TAATATTCCATATTGAAAAAGGAAGAATTCGTTATGAAAAGCTATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (8-31)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Staphylococcus aureus MW2	99.324	100	0.993
comGD	Staphylococcus aureus N315	99.324	100	0.993